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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170164147
CEOM01203498
338234
Gammaproteobacteria
GAC
Val
>WENV170163540
CEOM01145403
149035
Gammaproteobacteria
CCG
Arg
>WENV170163820
CEOM01178079
149035
Gammaproteobacteria
CCG
Arg
>WENV170163067
CEOM01091387
244202
Gammaproteobacteria
TTT
Lys
>WENV170162734
CEOM01058799
61925
Gammaproteobacteria
TAA
Leu
>WENV170163074
CEOM01091871
61925
Gammaproteobacteria
TAA
Leu
>WENV170164281
CEOM01225898
241476
Gammaproteobacteria
TTT
Lys
>WENV170162798
CEOM01065223
147647
Gammaproteobacteria
CAT
Met
>WENV170162723
CEOM01057358
240642
Gammaproteobacteria
GTT
Asn
>WENV170163022
CEOM01086740
240642
Gammaproteobacteria
GTT
Asn
>WENV170163128
CEOM01097479
240642
Gammaproteobacteria
GTT
Asn
>WENV170163666
CEOM01161520
240642
Gammaproteobacteria
GTT
Asn
>WENV170164284
CEOM01229499
338534
Gammaproteobacteria
TCC
Gly
>WENV170163714
CEOM01167671
145261
Gammaproteobacteria
CAT
Met
>WENV170162179
CEOM01009035
412799
Gammaproteobacteria
GCA
Cys
>WENV170163657
CEOM01160498
340801
Gammaproteobacteria
CCT
Arg
>WENV170162242
CEOM01013311
6976
Gammaproteobacteria
GCT
Ser
>WENV170162634
CEOM01047693
260238
Gammaproteobacteria
>WENV170162777
CEOM01063647
260238
Gammaproteobacteria
>WENV170163033
CEOM01087722
260238
Gammaproteobacteria
>WENV170164468
CEOM01349682
252289
Gammaproteobacteria
TTT
Lys
>WENV170163489
CEOM01136900
411766
Gammaproteobacteria
GCA
Cys
>WENV170162107
CEOM01003749
59830
Gammaproteobacteria
CAA
Leu
>WENV170162418
CEOM01028958
59830
Gammaproteobacteria
CAA
Leu
>WENV170162273
CEOM01016515
238510
Gammaproteobacteria
GCC
Gly
>WENV170162477
CEOM01034657
238510
Gammaproteobacteria
GCC
Gly
>WENV170163418
CEOM01130098
412476
Gammaproteobacteria
TCC
Gly
>WENV170162775
CEOM01063394
10767
Gammaproteobacteria
GCT
Ser
>WENV170162803
CEOM01065363
145713
Gammaproteobacteria
CAT
Met
>WENV170163481
CEOM01136239
250885
Gammaproteobacteria
TGC
Ala
>WENV170162923
CEOM01076538
237421
Gammaproteobacteria
TGT
Thr
>WENV170164222
CEOM01206621
247088
Gammaproteobacteria
CCA
Trp
>WENV170162389
CEOM01025945
411735
Gammaproteobacteria
GCA
Cys
>WENV170164322
CEOM01251483
411735
Gammaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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