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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170169615
CEOP01222473
183605
Gammaproteobacteria
CCG
Arg
>WENV170167578
CEOP01021751
312287
Gammaproteobacteria
TGT
Thr
>WENV170168473
CEOP01093164
312287
Gammaproteobacteria
TGT
Thr
>WENV170168914
CEOP01138231
312287
Gammaproteobacteria
TGT
Thr
>WENV170168653
CEOP01111555
61925
Gammaproteobacteria
TAA
Leu
>WENV170168358
CEOP01081832
241476
Gammaproteobacteria
TTT
Lys
>WENV170169909
CEOP01245438
153865
Gammaproteobacteria
CCG
Arg
>WENV170168580
CEOP01104659
149036
Gammaproteobacteria
CCA
Trp
>WENV170170179
CEOP01386389
145261
Gammaproteobacteria
CAT
Met
>WENV170168598
CEOP01106174
69672
Gammaproteobacteria
TAA
Leu
>WENV170169386
CEOP01197238
301232
Gammaproteobacteria
TTC
Glu
>WENV170169308
CEOP01185621
147324
Gammaproteobacteria
GTG
His
>WENV170168506
CEOP01096133
412373
Gammaproteobacteria
GCA
Cys
>WENV170168931
CEOP01139926
243921
Gammaproteobacteria
TTT
Lys
>WENV170170342
CEOP01454450
59658
Gammaproteobacteria
CAA
Leu
>WENV170168900
CEOP01136529
237421
Gammaproteobacteria
TGT
Thr
>WENV170170021
CEOP01264905
179790
Gammaproteobacteria
CAT
Met
>WENV170168389
CEOP01085217
245151
Gammaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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