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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170170464
CEOQ01004359
339737
Alphaproteobacteria
GAC
Val
>WENV170172678
CEOQ01138491
149985
Alphaproteobacteria
ACG
Arg
>WENV170173346
CEOQ01201217
306070
Alphaproteobacteria
CCA
Trp
>WENV170174198
CEOQ01275275
237489
Alphaproteobacteria
CAT
Met
>WENV170170735
CEOQ01021009
267922
Alphaproteobacteria
CCA
Trp
>WENV170170454
CEOQ01003759
146875
Alphaproteobacteria
GTG
His
>WENV170171828
CEOQ01076895
421153
Alphaproteobacteria
>WENV170173024
CEOQ01171528
421153
Alphaproteobacteria
>WENV170171186
CEOQ01043348
338282
Alphaproteobacteria
GTT
Asn
>WENV170171163
CEOQ01042219
147577
Alphaproteobacteria
CCG
Arg
>WENV170174910
CEOQ01370494
199865
Alphaproteobacteria
CAT
Met
>WENV170173262
CEOQ01193434
31506
Alphaproteobacteria
TGA
Ser
>WENV170170440
CEOQ01003423
162801
Alphaproteobacteria
GTG
His
>WENV170170748
CEOQ01021828
162801
Alphaproteobacteria
GTG
His
>WENV170173302
CEOQ01197502
200119
Alphaproteobacteria
CAT
Met
>WENV170171348
CEOQ01050722
74116
Alphaproteobacteria
CAG
Leu
>WENV170174048
CEOQ01264408
294226
Alphaproteobacteria
>WENV170170452
CEOQ01003758
151733
Alphaproteobacteria
GGG
Pro
>WENV170170522
CEOQ01008405
339725
Alphaproteobacteria
GAA
Phe
>WENV170170479
CEOQ01005645
192195
Alphaproteobacteria
GTC
Asp
>WENV170172637
CEOQ01134823
192195
Alphaproteobacteria
GTC
Asp
>WENV170170657
CEOQ01014964
258175
Alphaproteobacteria
CGC
Ala
>WENV170170899
CEOQ01029361
258175
Alphaproteobacteria
CGC
Ala
>WENV170170455
CEOQ01003759
167926
Alphaproteobacteria
CAT
Met
>WENV170171333
CEOQ01050266
167926
Alphaproteobacteria
CAT
Met
>WENV170173092
CEOQ01178205
167926
Alphaproteobacteria
CAT
Met
>WENV170173040
CEOQ01173703
254522
Alphaproteobacteria
GAA
Phe
>WENV170172853
CEOQ01154948
319925
Alphaproteobacteria
TGT
Thr
>WENV170174510
CEOQ01294846
319925
Alphaproteobacteria
TGT
Thr
>WENV170172664
CEOQ01136842
160158
Alphaproteobacteria
GAT
Ile
>WENV170171829
CEOQ01076896
369678
Alphaproteobacteria
GGT
Thr
>WENV170172781
CEOQ01147659
96930
Alphaproteobacteria
TAG
Leu
>WENV170172848
CEOQ01154233
29831
Alphaproteobacteria
TGA
Ser
>WENV170171537
CEOQ01061299
21074
Alphaproteobacteria
GGA
Ser
>WENV170171764
CEOQ01073823
21074
Alphaproteobacteria
GGA
Ser
>WENV170171075
CEOQ01038781
377327
Alphaproteobacteria
GCC
Gly
>WENV170174186
CEOQ01274392
10904
Alphaproteobacteria
GCT
Ser
>WENV170172570
CEOQ01129897
193837
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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