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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170172431
CEOQ01118890
183605
Gammaproteobacteria
CCG
Arg
>WENV170171886
CEOQ01080537
312287
Gammaproteobacteria
TGT
Thr
>WENV170172170
CEOQ01099295
313881
Gammaproteobacteria
GGC
Ala
>WENV170174309
CEOQ01284397
313881
Gammaproteobacteria
GGC
Ala
>WENV170175028
CEOQ01431727
163492
Gammaproteobacteria
TGG
Pro
>WENV170170503
CEOQ01006940
146435
Gammaproteobacteria
TGG
Pro
>WENV170171132
CEOQ01040815
279385
Gammaproteobacteria
TTT
Lys
>WENV170171133
CEOQ01040815
279385
Gammaproteobacteria
TTT
Lys
>WENV170173390
CEOQ01206580
249887
Gammaproteobacteria
GGT
Thr
>WENV170173844
CEOQ01248985
58822
Gammaproteobacteria
CAA
Leu
>WENV170174823
CEOQ01329034
160030
Gammaproteobacteria
GGG
Pro
>WENV170172262
CEOQ01105383
145367
Gammaproteobacteria
GGG
Pro
>WENV170174454
CEOQ01291796
269248
Gammaproteobacteria
CCA
Trp
>WENV170171821
CEOQ01076296
145196
Gammaproteobacteria
CAT
Met
>WENV170170847
CEOQ01026543
185163
Gammaproteobacteria
ACG
Arg
>WENV170170848
CEOQ01026543
185163
Gammaproteobacteria
ACG
Arg
>WENV170173052
CEOQ01174661
307413
Gammaproteobacteria
TTT
Lys
>WENV170174319
CEOQ01284945
146791
Gammaproteobacteria
GAC
Val
>WENV170172046
CEOQ01089927
322642
Gammaproteobacteria
GGT
Thr
>WENV170172954
CEOQ01164203
16284
Gammaproteobacteria
TGA
Ser
>WENV170173499
CEOQ01217333
412799
Gammaproteobacteria
GCA
Cys
>WENV170175041
CEOQ01436475
340801
Gammaproteobacteria
CCT
Arg
>WENV170170458
CEOQ01003896
426403
Gammaproteobacteria
GCA
Cys
>WENV170172949
CEOQ01163902
152301
Gammaproteobacteria
GAT
Ile
>WENV170172734
CEOQ01142949
247974
Gammaproteobacteria
CCA
Trp
>WENV170170846
CEOQ01026543
10767
Gammaproteobacteria
GCT
Ser
>WENV170173500
CEOQ01217333
77137
Gammaproteobacteria
TAA
Leu
>WENV170172796
CEOQ01149254
195303
Gammaproteobacteria
GAT
Ile
>WENV170170512
CEOQ01007456
203054
Gammaproteobacteria
ACG
Arg
>WENV170170697
CEOQ01018365
411735
Gammaproteobacteria
GCA
Cys
>WENV170172232
CEOQ01104050
411735
Gammaproteobacteria
GCA
Cys
>WENV170171442
CEOQ01056491
101786
Gammaproteobacteria
GAG
Leu
>WENV170171241
CEOQ01046576
198797
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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