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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170175827
CEOS01011304
95750
Gammaproteobacteria
TAG
Leu
>WENV170177087
CEOS01178366
237412
Gammaproteobacteria
TAC
Val
>WENV170175722
CEOS01001160
147118
Gammaproteobacteria
GAC
Val
>WENV170176498
CEOS01084971
113688
Gammaproteobacteria
GTA
Tyr
>WENV170176996
CEOS01145117
241136
Gammaproteobacteria
TTG
Gln
>WENV170176857
CEOS01132205
250885
Gammaproteobacteria
TGC
Ala
>WENV170176382
CEOS01070389
59460
Gammaproteobacteria
CAA
Leu
>WENV170176528
CEOS01088816
243485
Gammaproteobacteria
TGT
Thr
>WENV170176572
CEOS01094222
146807
Gammaproteobacteria
TCT
Arg
>WENV170176716
CEOS01115569
59415
Gammaproteobacteria
TAA
Leu
>WENV170176671
CEOS01108579
147120
Gammaproteobacteria
CGG
Pro
>WENV170176760
CEOS01120748
411735
Gammaproteobacteria
GCA
Cys
>WENV170177184
CEOS01217504
147112
Gammaproteobacteria
GGG
Pro
>WENV170176444
CEOS01077294
175964
Gammaproteobacteria
CAT
Met
>WENV170175919
CEOS01019016
158083
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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