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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170184334
CEOZ01080615
61925
Gammaproteobacteria
TAA
Leu
>WENV170185234
CEOZ01201110
240642
Gammaproteobacteria
GTT
Asn
>WENV170184195
CEOZ01060909
148148
Gammaproteobacteria
GAC
Val
>WENV170185563
CEOZ01322453
95750
Gammaproteobacteria
TAG
Leu
>WENV170183729
CEOZ01003560
341782
Gammaproteobacteria
TTG
Gln
>WENV170185063
CEOZ01179432
145713
Gammaproteobacteria
CAT
Met
>WENV170183773
CEOZ01007936
250885
Gammaproteobacteria
TGC
Ala
>WENV170185455
CEOZ01232112
59460
Gammaproteobacteria
CAA
Leu
>WENV170184175
CEOZ01059288
247088
Gammaproteobacteria
CCA
Trp
>WENV170184382
CEOZ01086081
247088
Gammaproteobacteria
CCA
Trp
>WENV170185051
CEOZ01176994
247088
Gammaproteobacteria
CCA
Trp
>WENV170185245
CEOZ01202423
247088
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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