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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170186225
CEPA01026406
267489
Cyanobacteriota
GGC
Ala
>WENV170186501
CEPA01054343
267489
Cyanobacteriota
GGC
Ala
>WENV170186611
CEPA01064518
267489
Cyanobacteriota
GGC
Ala
>WENV170186798
CEPA01086084
267489
Cyanobacteriota
GGC
Ala
>WENV170186899
CEPA01096020
267489
Cyanobacteriota
GGC
Ala
>WENV170186909
CEPA01096925
267489
Cyanobacteriota
GGC
Ala
>WENV170187180
CEPA01130676
267489
Cyanobacteriota
GGC
Ala
>WENV170187248
CEPA01140135
267489
Cyanobacteriota
GGC
Ala
>WENV170187402
CEPA01157280
267489
Cyanobacteriota
GGC
Ala
>WENV170187415
CEPA01158898
267489
Cyanobacteriota
GGC
Ala
>WENV170187510
CEPA01165990
267489
Cyanobacteriota
GGC
Ala
>WENV170186103
CEPA01018313
145761
Cyanobacteriota
GTC
Asp
>WENV170186306
CEPA01033839
145761
Cyanobacteriota
GTC
Asp
>WENV170187019
CEPA01109521
145761
Cyanobacteriota
GTC
Asp
>WENV170187064
CEPA01115912
145761
Cyanobacteriota
GTC
Asp
>WENV170187256
CEPA01141376
145761
Cyanobacteriota
GTC
Asp
>WENV170186643
CEPA01067800
96363
Cyanobacteriota
TAG
Leu
>WENV170186699
CEPA01072794
96363
Cyanobacteriota
TAG
Leu
>WENV170186789
CEPA01084873
96363
Cyanobacteriota
TAG
Leu
>WENV170186804
CEPA01086529
96363
Cyanobacteriota
TAG
Leu
>WENV170186885
CEPA01094573
96363
Cyanobacteriota
TAG
Leu
>WENV170186939
CEPA01100054
96363
Cyanobacteriota
TAG
Leu
>WENV170187059
CEPA01115410
96363
Cyanobacteriota
TAG
Leu
>WENV170187096
CEPA01120097
96363
Cyanobacteriota
TAG
Leu
>WENV170187134
CEPA01124224
96363
Cyanobacteriota
TAG
Leu
>WENV170187160
CEPA01128185
96363
Cyanobacteriota
TAG
Leu
>WENV170187234
CEPA01137998
96363
Cyanobacteriota
TAG
Leu
>WENV170187316
CEPA01148437
349164
Cyanobacteriota
TGT
Thr
>WENV170186679
CEPA01071457
149253
Cyanobacteriota
ACG
Arg
>WENV170186433
CEPA01048275
23971
Cyanobacteriota
TGA
Ser
>WENV170186528
CEPA01057292
23971
Cyanobacteriota
TGA
Ser
>WENV170186556
CEPA01059810
23971
Cyanobacteriota
TGA
Ser
>WENV170186574
CEPA01061766
23971
Cyanobacteriota
TGA
Ser
>WENV170187197
CEPA01133085
23971
Cyanobacteriota
TGA
Ser
>WENV170186069
CEPA01015742
58999
Cyanobacteriota
CAG
Leu
>WENV170186441
CEPA01049066
162346
Cyanobacteriota
GGG
Pro
>WENV170186790
CEPA01085295
162346
Cyanobacteriota
GGG
Pro
>WENV170185945
CEPA01005679
252089
Cyanobacteriota
GTG
His
>WENV170187555
CEPA01169531
252089
Cyanobacteriota
GTG
His
>WENV170186015
CEPA01011790
95762
Cyanobacteriota
AAG
Leu
>WENV170186625
CEPA01065923
95762
Cyanobacteriota
AAG
Leu
>WENV170187541
CEPA01168422
95762
Cyanobacteriota
AAG
Leu
>WENV170185993
CEPA01010707
267488
Cyanobacteriota
CAT
Met
>WENV170185924
CEPA01003218
145893
Cyanobacteriota
CAT
Met
>WENV170186484
CEPA01053466
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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