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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170189593
CEPC01010223
149985
Alphaproteobacteria
ACG
Arg
>WENV170189969
CEPC01049662
66752
Alphaproteobacteria
CAG
Leu
>WENV170189760
CEPC01027895
23468
Alphaproteobacteria
GCT
Ser
>WENV170189832
CEPC01033318
339490
Alphaproteobacteria
GAC
Val
>WENV170189719
CEPC01022808
235492
Alphaproteobacteria
GAA
Phe
>WENV170190676
CEPC01137107
276379
Alphaproteobacteria
TGC
Ala
>WENV170190068
CEPC01059614
283763
Alphaproteobacteria
TGC
Ala
>WENV170189526
CEPC01004834
167926
Alphaproteobacteria
CAT
Met
>WENV170189979
CEPC01050615
161002
Alphaproteobacteria
GTG
His
>WENV170189945
CEPC01047400
289655
Alphaproteobacteria
GGC
Ala
>WENV170190974
CEPC01196015
426273
Alphaproteobacteria
GCA
Cys
>WENV170190417
CEPC01105016
242540
Alphaproteobacteria
TGC
Ala
>WENV170190528
CEPC01121218
241518
Alphaproteobacteria
CCA
Trp
>WENV170190529
CEPC01121441
369678
Alphaproteobacteria
GGT
Thr
>WENV170190311
CEPC01091811
150194
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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