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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170190903
CEPC01168234
149035
Gammaproteobacteria
CCG
Arg
>WENV170190418
CEPC01105024
290337
Gammaproteobacteria
TAC
Val
>WENV170189650
CEPC01015285
185163
Gammaproteobacteria
ACG
Arg
>WENV170189651
CEPC01015285
185163
Gammaproteobacteria
ACG
Arg
>WENV170189567
CEPC01007910
149036
Gammaproteobacteria
CCA
Trp
>WENV170190504
CEPC01117736
301232
Gammaproteobacteria
TTC
Glu
>WENV170190337
CEPC01094691
412799
Gammaproteobacteria
GCA
Cys
>WENV170190007
CEPC01053740
340801
Gammaproteobacteria
CCT
Arg
>WENV170190054
CEPC01058412
240084
Gammaproteobacteria
GGT
Thr
>WENV170189893
CEPC01042376
412476
Gammaproteobacteria
TCC
Gly
>WENV170189649
CEPC01015285
10767
Gammaproteobacteria
GCT
Ser
>WENV170189933
CEPC01045359
341782
Gammaproteobacteria
TTG
Gln
>WENV170190711
CEPC01140250
241136
Gammaproteobacteria
TTG
Gln
>WENV170190751
CEPC01144506
412373
Gammaproteobacteria
GCA
Cys
>WENV170189874
CEPC01040333
128930
Gammaproteobacteria
GTC
Asp
>WENV170190693
CEPC01138202
59658
Gammaproteobacteria
CAA
Leu
>WENV170189750
CEPC01026012
149037
Gammaproteobacteria
GAC
Val
>WENV170190321
CEPC01092780
237159
Gammaproteobacteria
GTG
His
>WENV170190770
CEPC01146235
175964
Gammaproteobacteria
CAT
Met
>WENV170189894
CEPC01042376
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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