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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170192104
CEPD01138188
237493
Alphaproteobacteria
CCA
Trp
>WENV170191619
CEPD01041172
23385
Alphaproteobacteria
CGA
Ser
>WENV170191397
CEPD01015045
237489
Alphaproteobacteria
CAT
Met
>WENV170191399
CEPD01015075
10665
Alphaproteobacteria
GCT
Ser
>WENV170191620
CEPD01041233
191197
Alphaproteobacteria
CCG
Arg
>WENV170191552
CEPD01033623
339724
Alphaproteobacteria
TTG
Gln
>WENV170191645
CEPD01043799
421153
Alphaproteobacteria
>WENV170192125
CEPD01141640
199865
Alphaproteobacteria
CAT
Met
>WENV170191695
CEPD01049653
162801
Alphaproteobacteria
GTG
His
>WENV170191786
CEPD01062013
417107
Alphaproteobacteria
GCA
Cys
>WENV170191877
CEPD01073237
339725
Alphaproteobacteria
GAA
Phe
>WENV170191926
CEPD01087323
235427
Alphaproteobacteria
CCA
Trp
>WENV170191708
CEPD01053227
339305
Alphaproteobacteria
GGT
Thr
>WENV170191650
CEPD01044458
412281
Alphaproteobacteria
CTG
Gln
>WENV170191591
CEPD01036769
147289
Alphaproteobacteria
GTC
Asp
>WENV170191794
CEPD01063370
21074
Alphaproteobacteria
GGA
Ser
>WENV170191879
CEPD01073278
114040
Alphaproteobacteria
CAA
Leu
>WENV170191494
CEPD01026811
351007
Alphaproteobacteria
TTC
Glu
>WENV170191621
CEPD01041301
62052
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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