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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170193260
CEPH01042165
421153
Alphaproteobacteria
>WENV170193297
CEPH01052511
421153
Alphaproteobacteria
>WENV170193258
CEPH01039993
108676
Alphaproteobacteria
CAA
Leu
>WENV170193336
CEPH01062470
74116
Alphaproteobacteria
CAG
Leu
>WENV170193482
CEPH01086351
199865
Alphaproteobacteria
CAT
Met
>WENV170193130
CEPH01018701
167926
Alphaproteobacteria
CAT
Met
>WENV170193266
CEPH01043731
167926
Alphaproteobacteria
CAT
Met
>WENV170193431
CEPH01080795
237493
Alphaproteobacteria
CCA
Trp
>WENV170193563
CEPH01136133
251568
Alphaproteobacteria
CCA
Trp
>WENV170193337
CEPH01062488
191695
Alphaproteobacteria
CCT
Arg
>WENV170193254
CEPH01039466
239035
Alphaproteobacteria
CGC
Ala
>WENV170193606
CEPH01158648
385404
Alphaproteobacteria
CTC
Glu
>WENV170193168
CEPH01024720
339725
Alphaproteobacteria
GAA
Phe
>WENV170193430
CEPH01080665
339725
Alphaproteobacteria
GAA
Phe
>WENV170193321
CEPH01059430
339737
Alphaproteobacteria
GAC
Val
>WENV170193542
CEPH01119562
340106
Alphaproteobacteria
GCC
Gly
>WENV170193381
CEPH01072416
377327
Alphaproteobacteria
GCC
Gly
>WENV170193434
CEPH01080933
10904
Alphaproteobacteria
GCT
Ser
>WENV170193282
CEPH01046667
21074
Alphaproteobacteria
GGA
Ser
>WENV170193364
CEPH01068721
21074
Alphaproteobacteria
GGA
Ser
>WENV170193303
CEPH01053773
151733
Alphaproteobacteria
GGG
Pro
>WENV170193494
CEPH01086813
369678
Alphaproteobacteria
GGT
Thr
>WENV170193373
CEPH01070402
147289
Alphaproteobacteria
GTC
Asp
>WENV170193439
CEPH01082157
146875
Alphaproteobacteria
GTG
His
>WENV170193325
CEPH01060346
162801
Alphaproteobacteria
GTG
His
>WENV170193388
CEPH01073981
152773
Alphaproteobacteria
GTG
His
>WENV170193569
CEPH01140634
236134
Alphaproteobacteria
TAC
Val
>WENV170193412
CEPH01078972
95928
Alphaproteobacteria
TAG
Leu
>WENV170193272
CEPH01045027
23572
Alphaproteobacteria
TGA
Ser
>WENV170193113
CEPH01013469
339724
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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