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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170193580
CEPH01145673
165036
Gammaproteobacteria
CCA
Trp
>WENV170193109
CEPH01012327
149035
Gammaproteobacteria
CCG
Arg
>WENV170193038
CEPH01001182
149036
Gammaproteobacteria
CCA
Trp
>WENV170193522
CEPH01096971
24366
Gammaproteobacteria
GGA
Ser
>WENV170193561
CEPH01134414
322642
Gammaproteobacteria
GGT
Thr
>WENV170193062
CEPH01004815
412799
Gammaproteobacteria
GCA
Cys
>WENV170193104
CEPH01012172
340801
Gammaproteobacteria
CCT
Arg
>WENV170193514
CEPH01091712
426403
Gammaproteobacteria
GCA
Cys
>WENV170193083
CEPH01008711
199268
Gammaproteobacteria
ACG
Arg
>WENV170193084
CEPH01008711
199268
Gammaproteobacteria
ACG
Arg
>WENV170193562
CEPH01135589
238510
Gammaproteobacteria
GCC
Gly
>WENV170193063
CEPH01004815
77137
Gammaproteobacteria
TAA
Leu
>WENV170193212
CEPH01030516
410215
Gammaproteobacteria
TTG
Gln
>WENV170193197
CEPH01029808
319100
Gammaproteobacteria
GGT
Thr
>WENV170193187
CEPH01028527
151889
Gammaproteobacteria
CAT
Met
>WENV170193225
CEPH01032290
59658
Gammaproteobacteria
CAA
Leu
>WENV170193612
CEPH01160706
238761
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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