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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170193979
CEPJ01001362
369678
Alphaproteobacteria
GGT
Thr
>WENV170194174
CEPJ01016310
144964
Alphaproteobacteria
TGG
Pro
>WENV170194316
CEPJ01025826
161002
Alphaproteobacteria
GTG
His
>WENV170194330
CEPJ01026504
348781
Alphaproteobacteria
GAA
Phe
>WENV170194331
CEPJ01026512
338282
Alphaproteobacteria
GTT
Asn
>WENV170194620
CEPJ01049193
266073
Alphaproteobacteria
TTT
Lys
>WENV170194632
CEPJ01049504
279830
Alphaproteobacteria
TAC
Val
>WENV170194641
CEPJ01050846
237155
Alphaproteobacteria
>WENV170194719
CEPJ01059533
258175
Alphaproteobacteria
CGC
Ala
>WENV170194733
CEPJ01060727
338282
Alphaproteobacteria
GTT
Asn
>WENV170194888
CEPJ01078451
165250
Alphaproteobacteria
TGG
Pro
>WENV170194950
CEPJ01085207
283763
Alphaproteobacteria
TGC
Ala
>WENV170195311
CEPJ01124083
266073
Alphaproteobacteria
TTT
Lys
>WENV170195353
CEPJ01127805
279830
Alphaproteobacteria
TAC
Val
>WENV170195549
CEPJ01142110
368915
Alphaproteobacteria
GGT
Thr
>WENV170195574
CEPJ01142940
200119
Alphaproteobacteria
CAT
Met
>WENV170195655
CEPJ01194995
243633
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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