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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170194126
CEPJ01013281
313881
Gammaproteobacteria
GGC
Ala
>WENV170194220
CEPJ01019587
240642
Gammaproteobacteria
GTT
Asn
>WENV170194262
CEPJ01021914
237421
Gammaproteobacteria
TGT
Thr
>WENV170194304
CEPJ01024304
148148
Gammaproteobacteria
GAC
Val
>WENV170194305
CEPJ01024400
240642
Gammaproteobacteria
GTT
Asn
>WENV170194434
CEPJ01033399
193275
Gammaproteobacteria
GAT
Ile
>WENV170194441
CEPJ01033915
319098
Gammaproteobacteria
TAC
Val
>WENV170194492
CEPJ01038005
61925
Gammaproteobacteria
TAA
Leu
>WENV170194557
CEPJ01043150
322642
Gammaproteobacteria
GGT
Thr
>WENV170194646
CEPJ01051138
240642
Gammaproteobacteria
GTT
Asn
>WENV170194663
CEPJ01053699
171935
Gammaproteobacteria
ACG
Arg
>WENV170194944
CEPJ01084373
322642
Gammaproteobacteria
GGT
Thr
>WENV170195009
CEPJ01090898
190809
Gammaproteobacteria
GGG
Pro
>WENV170195048
CEPJ01094425
244202
Gammaproteobacteria
TTT
Lys
>WENV170195138
CEPJ01104306
235886
Gammaproteobacteria
TTC
Glu
>WENV170195643
CEPJ01182386
235452
Gammaproteobacteria
GAA
Phe
>WENV170195703
CEPJ01232633
154268
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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