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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170200919
CEPP01014402
252328
Alphaproteobacteria
TTT
Lys
>WENV170200885
CEPP01004319
268154
Alphaproteobacteria
TGT
Thr
>WENV170200861
CEPP01001621
248021
Alphaproteobacteria
CTT
Lys
>WENV170200901
CEPP01008438
350475
Alphaproteobacteria
GGT
Thr
>WENV170200859
CEPP01001620
156543
Alphaproteobacteria
TTT
Lys
>WENV170201083
CEPP01071521
147361
Alphaproteobacteria
GGG
Pro
>WENV170201024
CEPP01049160
97145
Alphaproteobacteria
TAG
Leu
>WENV170201130
CEPP01078642
339432
Alphaproteobacteria
GTT
Asn
>WENV170200949
CEPP01018533
364533
Alphaproteobacteria
GCC
Gly
>WENV170200915
CEPP01013426
289655
Alphaproteobacteria
GGC
Ala
>WENV170201098
CEPP01076398
10642
Alphaproteobacteria
GCT
Ser
>WENV170200900
CEPP01008438
152773
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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