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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170201185
CEPQ01001629
248752
Betaproteobacteria
GCC
Gly
>WENV170201186
CEPQ01001629
248752
Betaproteobacteria
GCC
Gly
>WENV170201217
CEPQ01002777
145694
Betaproteobacteria
ACG
Arg
>WENV170201488
CEPQ01025390
61762
Betaproteobacteria
TAA
Leu
>WENV170201753
CEPQ01049275
145695
Betaproteobacteria
GGG
Pro
>WENV170201444
CEPQ01020863
238346
Betaproteobacteria
CGT
Thr
>WENV170201430
CEPQ01019873
426829
Betaproteobacteria
TCC
Gly
>WENV170201643
CEPQ01041308
426829
Betaproteobacteria
TCC
Gly
>WENV170201355
CEPQ01014886
238349
Betaproteobacteria
CTT
Lys
>WENV170202012
CEPQ01101386
146726
Betaproteobacteria
TCT
Arg
>WENV170201742
CEPQ01048467
4869
Betaproteobacteria
GCT
Ser
>WENV170201722
CEPQ01047566
415147
Betaproteobacteria
CCC
Gly
>WENV170201668
CEPQ01043751
147855
Betaproteobacteria
TTG
Gln
>WENV170201579
CEPQ01034147
151824
Betaproteobacteria
TCT
Arg
>WENV170201799
CEPQ01052294
238002
Betaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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