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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170202967
CEPS01015403
185151
Gammaproteobacteria
TCT
Arg
>WENV170202882
CEPS01011349
149035
Gammaproteobacteria
CCG
Arg
>WENV170203474
CEPS01055357
149036
Gammaproteobacteria
CCA
Trp
>WENV170203761
CEPS01084143
412799
Gammaproteobacteria
GCA
Cys
>WENV170203972
CEPS01098404
95590
Gammaproteobacteria
>WENV170203987
CEPS01099544
194246
Gammaproteobacteria
CAT
Met
>WENV170202966
CEPS01015403
149038
Gammaproteobacteria
TGG
Pro
>WENV170203916
CEPS01096432
150587
Gammaproteobacteria
CAT
Met
>WENV170203099
CEPS01023334
240084
Gammaproteobacteria
GGT
Thr
>WENV170202705
CEPS01001486
10767
Gammaproteobacteria
GCT
Ser
>WENV170202772
CEPS01005694
173040
Gammaproteobacteria
GAC
Val
>WENV170203420
CEPS01050451
425813
Gammaproteobacteria
GCA
Cys
>WENV170203171
CEPS01030512
151889
Gammaproteobacteria
CAT
Met
>WENV170202883
CEPS01011384
195303
Gammaproteobacteria
GAT
Ile
>WENV170202777
CEPS01005792
186449
Gammaproteobacteria
TGG
Pro
>WENV170203236
CEPS01035221
59658
Gammaproteobacteria
CAA
Leu
>WENV170203462
CEPS01054262
149037
Gammaproteobacteria
GAC
Val
>WENV170203150
CEPS01028955
101786
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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