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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170205435
CEPT01089226
306070
Alphaproteobacteria
CCA
Trp
>WENV170205154
CEPT01064232
282595
Alphaproteobacteria
CCA
Trp
>WENV170205139
CEPT01062890
23561
Alphaproteobacteria
GGA
Ser
>WENV170205112
CEPT01060693
339454
Alphaproteobacteria
>WENV170204857
CEPT01040172
339722
Alphaproteobacteria
TTG
Gln
>WENV170204685
CEPT01025590
27877
Alphaproteobacteria
GGA
Ser
>WENV170204402
CEPT01001865
167926
Alphaproteobacteria
CAT
Met
>WENV170206281
CEPT01187599
368915
Alphaproteobacteria
GGT
Thr
>WENV170205724
CEPT01117681
279830
Alphaproteobacteria
TAC
Val
>WENV170205004
CEPT01053655
160158
Alphaproteobacteria
GAT
Ile
>WENV170204555
CEPT01015113
266073
Alphaproteobacteria
TTT
Lys
>WENV170204993
CEPT01053132
266073
Alphaproteobacteria
TTT
Lys
>WENV170205416
CEPT01087614
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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