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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170206665
CEPU01000165
113700
Alphaproteobacteria
>WENV170207372
CEPU01074471
149985
Alphaproteobacteria
ACG
Arg
>WENV170207042
CEPU01036464
147089
Alphaproteobacteria
ACG
Arg
>WENV170206814
CEPU01014600
167926
Alphaproteobacteria
CAT
Met
>WENV170206964
CEPU01028711
167926
Alphaproteobacteria
CAT
Met
>WENV170206928
CEPU01025674
348781
Alphaproteobacteria
GAA
Phe
>WENV170206936
CEPU01026569
348781
Alphaproteobacteria
GAA
Phe
>WENV170207780
CEPU01123121
348781
Alphaproteobacteria
GAA
Phe
>WENV170207507
CEPU01092286
160158
Alphaproteobacteria
GAT
Ile
>WENV170208108
CEPU01149792
364406
Alphaproteobacteria
GCC
Gly
>WENV170207017
CEPU01034116
340106
Alphaproteobacteria
GCC
Gly
>WENV170206999
CEPU01031902
23468
Alphaproteobacteria
GCT
Ser
>WENV170208197
CEPU01196187
16408
Alphaproteobacteria
GGA
Ser
>WENV170206982
CEPU01029839
176908
Alphaproteobacteria
GTC
Asp
>WENV170207303
CEPU01066138
150356
Alphaproteobacteria
GTC
Asp
>WENV170207112
CEPU01043825
161002
Alphaproteobacteria
GTG
His
>WENV170207152
CEPU01047901
161002
Alphaproteobacteria
GTG
His
>WENV170207117
CEPU01044164
338282
Alphaproteobacteria
GTT
Asn
>WENV170207328
CEPU01069179
152248
Alphaproteobacteria
TGG
Pro
>WENV170206833
CEPU01015524
252148
Alphaproteobacteria
TGT
Thr
>WENV170207109
CEPU01043558
266073
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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