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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170215454
CEPX01156945
237493
Alphaproteobacteria
CCA
Trp
>WENV170214502
CEPX01090010
199865
Alphaproteobacteria
CAT
Met
>WENV170213052
CEPX01007668
185767
Alphaproteobacteria
CCG
Arg
>WENV170214591
CEPX01095260
162801
Alphaproteobacteria
GTG
His
>WENV170215812
CEPX01178103
162801
Alphaproteobacteria
GTG
His
>WENV170216862
CEPX01286069
74116
Alphaproteobacteria
CAG
Leu
>WENV170216093
CEPX01191414
339725
Alphaproteobacteria
GAA
Phe
>WENV170216953
CEPX01312569
192195
Alphaproteobacteria
GTC
Asp
>WENV170213955
CEPX01060127
167926
Alphaproteobacteria
CAT
Met
>WENV170213482
CEPX01032912
289655
Alphaproteobacteria
GGC
Ala
>WENV170212934
CEPX01001296
260015
Alphaproteobacteria
CTC
Glu
>WENV170217298
CEPX01374287
412281
Alphaproteobacteria
CTG
Gln
>WENV170217470
CEPX01394558
369678
Alphaproteobacteria
GGT
Thr
>WENV170216121
CEPX01192322
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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