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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170229057
CEQG01070823
166654
Gammaproteobacteria
GAC
Val
>WENV170228478
CEQG01014284
95633
Gammaproteobacteria
GTA
Tyr
>WENV170229712
CEQG01151759
279385
Gammaproteobacteria
TTT
Lys
>WENV170228723
CEQG01034690
149035
Gammaproteobacteria
CCG
Arg
>WENV170228334
CEQG01002542
160030
Gammaproteobacteria
GGG
Pro
>WENV170229686
CEQG01148229
160030
Gammaproteobacteria
GGG
Pro
>WENV170228644
CEQG01028387
59177
Gammaproteobacteria
TAA
Leu
>WENV170229061
CEQG01071052
147114
Gammaproteobacteria
CCT
Arg
>WENV170229174
CEQG01082957
145367
Gammaproteobacteria
GGG
Pro
>WENV170229957
CEQG01251168
269248
Gammaproteobacteria
CCA
Trp
>WENV170229177
CEQG01083473
276072
Gammaproteobacteria
>WENV170229141
CEQG01078589
235452
Gammaproteobacteria
GAA
Phe
>WENV170228410
CEQG01008669
59172
Gammaproteobacteria
CAA
Leu
>WENV170229426
CEQG01117424
149036
Gammaproteobacteria
CCA
Trp
>WENV170228392
CEQG01006878
338534
Gammaproteobacteria
TCC
Gly
>WENV170229878
CEQG01222079
147778
Gammaproteobacteria
GGG
Pro
>WENV170228643
CEQG01028387
413586
Gammaproteobacteria
GCA
Cys
>WENV170229392
CEQG01114654
174801
Gammaproteobacteria
TGG
Pro
>WENV170229630
CEQG01141009
149073
Gammaproteobacteria
CAT
Met
>WENV170229190
CEQG01084704
412799
Gammaproteobacteria
GCA
Cys
>WENV170229058
CEQG01070823
152450
Gammaproteobacteria
GAC
Val
>WENV170229854
CEQG01207826
252289
Gammaproteobacteria
TTT
Lys
>WENV170228427
CEQG01010242
278046
Gammaproteobacteria
TGT
Thr
>WENV170228418
CEQG01009823
152301
Gammaproteobacteria
GAT
Ile
>WENV170228645
CEQG01028387
237708
Gammaproteobacteria
GCC
Gly
>WENV170228583
CEQG01022937
412476
Gammaproteobacteria
TCC
Gly
>WENV170229024
CEQG01064997
23429
Gammaproteobacteria
GGA
Ser
>WENV170229985
CEQG01260223
165387
Gammaproteobacteria
CCT
Arg
>WENV170228782
CEQG01040457
241136
Gammaproteobacteria
TTG
Gln
>WENV170230045
CEQG01275004
250885
Gammaproteobacteria
TGC
Ala
>WENV170228878
CEQG01049004
280036
Gammaproteobacteria
TTT
Lys
>WENV170229072
CEQG01071991
151889
Gammaproteobacteria
CAT
Met
>WENV170229215
CEQG01089562
186449
Gammaproteobacteria
TGG
Pro
>WENV170229511
CEQG01126619
236033
Gammaproteobacteria
TGT
Thr
>WENV170228934
CEQG01054528
243485
Gammaproteobacteria
TGT
Thr
>WENV170229660
CEQG01146016
243485
Gammaproteobacteria
TGT
Thr
>WENV170228594
CEQG01023416
243921
Gammaproteobacteria
TTT
Lys
>WENV170228576
CEQG01022614
59658
Gammaproteobacteria
CAA
Leu
>WENV170228894
CEQG01050350
182592
Gammaproteobacteria
GAC
Val
>WENV170228541
CEQG01018772
149037
Gammaproteobacteria
GAC
Val
>WENV170228547
CEQG01019091
149037
Gammaproteobacteria
GAC
Val
>WENV170228436
CEQG01011563
411735
Gammaproteobacteria
GCA
Cys
>WENV170229405
CEQG01115678
411735
Gammaproteobacteria
GCA
Cys
>WENV170228683
CEQG01031762
175964
Gammaproteobacteria
CAT
Met
>WENV170228942
CEQG01054992
266766
Gammaproteobacteria
TGT
Thr
>WENV170229582
CEQG01135556
173617
Gammaproteobacteria
GTC
Asp
>WENV170228584
CEQG01022937
239187
Gammaproteobacteria
GGT
Thr
>WENV170228556
CEQG01020258
179150
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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