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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170234783
CEQL01011173
165250
Alphaproteobacteria
TGG
Pro
>WENV170234788
CEQL01011503
242540
Alphaproteobacteria
TGC
Ala
>WENV170234870
CEQL01019121
200119
Alphaproteobacteria
CAT
Met
>WENV170235272
CEQL01062530
193550
Alphaproteobacteria
TCT
Arg
>WENV170235398
CEQL01077691
338622
Alphaproteobacteria
GTT
Asn
>WENV170235418
CEQL01080142
339305
Alphaproteobacteria
GGT
Thr
>WENV170235455
CEQL01084081
192195
Alphaproteobacteria
GTC
Asp
>WENV170235472
CEQL01085193
283763
Alphaproteobacteria
TGC
Ala
>WENV170235921
CEQL01135369
96322
Alphaproteobacteria
CAA
Leu
>WENV170235985
CEQL01139592
239035
Alphaproteobacteria
CGC
Ala
>WENV170236010
CEQL01142006
191197
Alphaproteobacteria
CCG
Arg
>WENV170236249
CEQL01183199
10657
Alphaproteobacteria
GCT
Ser
>WENV170236250
CEQL01183261
146683
Alphaproteobacteria
GTG
His
>WENV170236351
CEQL01247342
236134
Alphaproteobacteria
TAC
Val
>WENV170236393
CEQL01275040
432316
Alphaproteobacteria
GCA
Cys
>WENV170236401
CEQL01280851
239037
Alphaproteobacteria
TTT
Lys
>WENV170236528
CEQL01327792
383873
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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