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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170238075
CEQM01114681
238010
Alphaproteobacteria
TTT
Lys
>WENV170236848
CEQM01014098
149985
Alphaproteobacteria
ACG
Arg
>WENV170237075
CEQM01029009
147089
Alphaproteobacteria
ACG
Arg
>WENV170237841
CEQM01089453
58865
Alphaproteobacteria
GAG
Leu
>WENV170238628
CEQM01199019
16408
Alphaproteobacteria
GGA
Ser
>WENV170238056
CEQM01112358
339722
Alphaproteobacteria
TTG
Gln
>WENV170237763
CEQM01082487
339725
Alphaproteobacteria
GAA
Phe
>WENV170237136
CEQM01032588
167926
Alphaproteobacteria
CAT
Met
>WENV170236722
CEQM01005994
237281
Alphaproteobacteria
CGT
Thr
>WENV170237989
CEQM01105443
65244
Alphaproteobacteria
CAG
Leu
>WENV170237274
CEQM01042773
241518
Alphaproteobacteria
CCA
Trp
>WENV170237616
CEQM01068133
412281
Alphaproteobacteria
CTG
Gln
>WENV170237937
CEQM01099419
147289
Alphaproteobacteria
GTC
Asp
>WENV170238656
CEQM01208822
243633
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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