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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170238950
CEQN01003302
313881
Gammaproteobacteria
GGC
Ala
>WENV170239005
CEQN01008227
322642
Gammaproteobacteria
GGT
Thr
>WENV170239476
CEQN01042965
313881
Gammaproteobacteria
GGC
Ala
>WENV170239915
CEQN01078278
240642
Gammaproteobacteria
GTT
Asn
>WENV170240010
CEQN01087893
322642
Gammaproteobacteria
GGT
Thr
>WENV170240023
CEQN01089030
322642
Gammaproteobacteria
GGT
Thr
>WENV170240240
CEQN01106251
173040
Gammaproteobacteria
GAC
Val
>WENV170240551
CEQN01138762
61925
Gammaproteobacteria
TAA
Leu
>WENV170240752
CEQN01162217
240642
Gammaproteobacteria
GTT
Asn
>WENV170240863
CEQN01173659
145713
Gammaproteobacteria
CAT
Met
>WENV170241105
CEQN01198272
173040
Gammaproteobacteria
GAC
Val
>WENV170241400
CEQN01238641
412373
Gammaproteobacteria
GCA
Cys
>WENV170241615
CEQN01369762
250885
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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