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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170246463
CEQP01197841
338763
Actinomycetota
GCC
Gly
>WENV170244196
CEQP01007502
240960
Actinomycetota
TTC
Glu
>WENV170246093
CEQP01148293
95931
Actinomycetota
GTA
Tyr
>WENV170244510
CEQP01027809
147843
Actinomycetota
GAC
Val
>WENV170245420
CEQP01093919
240687
Actinomycetota
>WENV170245322
CEQP01086280
236214
Actinomycetota
CCA
Trp
>WENV170245870
CEQP01132694
236214
Actinomycetota
CCA
Trp
>WENV170246716
CEQP01302172
152216
Actinomycetota
GAT
Ile
>WENV170245821
CEQP01129165
149979
Actinomycetota
TGT
Thr
>WENV170244444
CEQP01022873
179547
Actinomycetota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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