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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170248313
CEQQ01119093
421153
Alphaproteobacteria
>WENV170248696
CEQQ01168024
339454
Alphaproteobacteria
>WENV170247062
CEQQ01014036
149985
Alphaproteobacteria
ACG
Arg
>WENV170247566
CEQQ01047137
65244
Alphaproteobacteria
CAG
Leu
>WENV170247129
CEQQ01017847
267922
Alphaproteobacteria
CCA
Trp
>WENV170247391
CEQQ01034476
258175
Alphaproteobacteria
CGC
Ala
>WENV170248144
CEQQ01099200
412281
Alphaproteobacteria
CTG
Gln
>WENV170248380
CEQQ01125725
412281
Alphaproteobacteria
CTG
Gln
>WENV170248671
CEQQ01153142
339725
Alphaproteobacteria
GAA
Phe
>WENV170247343
CEQQ01030804
359842
Alphaproteobacteria
GAC
Val
>WENV170247345
CEQQ01031132
365250
Alphaproteobacteria
GCC
Gly
>WENV170247372
CEQQ01032956
10665
Alphaproteobacteria
GCT
Ser
>WENV170247892
CEQQ01075994
82652
Alphaproteobacteria
GTA
Tyr
>WENV170247831
CEQQ01071083
162801
Alphaproteobacteria
GTG
His
>WENV170246941
CEQQ01006487
258529
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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