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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170249313
CEQS01005169
185163
Gammaproteobacteria
ACG
Arg
>WENV170249739
CEQS01034374
147052
Gammaproteobacteria
ACG
Arg
>WENV170249740
CEQS01034374
147052
Gammaproteobacteria
ACG
Arg
>WENV170250454
CEQS01142811
59172
Gammaproteobacteria
CAA
Leu
>WENV170249765
CEQS01036962
59658
Gammaproteobacteria
CAA
Leu
>WENV170249392
CEQS01009710
96080
Gammaproteobacteria
CAA
Leu
>WENV170250125
CEQS01068984
199984
Gammaproteobacteria
CAT
Met
>WENV170249534
CEQS01020530
147051
Gammaproteobacteria
CAT
Met
>WENV170249363
CEQS01007887
147048
Gammaproteobacteria
CCA
Trp
>WENV170249738
CEQS01034315
149036
Gammaproteobacteria
CCA
Trp
>WENV170249592
CEQS01022991
149035
Gammaproteobacteria
CCG
Arg
>WENV170250470
CEQS01146883
147111
Gammaproteobacteria
CCG
Arg
>WENV170249350
CEQS01007381
150183
Gammaproteobacteria
CCG
Arg
>WENV170250215
CEQS01072759
147114
Gammaproteobacteria
CCT
Arg
>WENV170249369
CEQS01008606
340801
Gammaproteobacteria
CCT
Arg
>WENV170249594
CEQS01023067
339596
Gammaproteobacteria
CCT
Arg
>WENV170249428
CEQS01012236
237711
Gammaproteobacteria
GAA
Phe
>WENV170250224
CEQS01073242
146791
Gammaproteobacteria
GAC
Val
>WENV170249416
CEQS01011024
152450
Gammaproteobacteria
GAC
Val
>WENV170249750
CEQS01035117
95975
Gammaproteobacteria
GAG
Leu
>WENV170249344
CEQS01007008
195303
Gammaproteobacteria
GAT
Ile
>WENV170249769
CEQS01037649
412799
Gammaproteobacteria
GCA
Cys
>WENV170249783
CEQS01039183
411842
Gammaproteobacteria
GCA
Cys
>WENV170250549
CEQS01162248
23669
Gammaproteobacteria
GCT
Ser
>WENV170249613
CEQS01025402
23644
Gammaproteobacteria
GGA
Ser
>WENV170249549
CEQS01021993
237221
Gammaproteobacteria
GGC
Ala
>WENV170249716
CEQS01032982
161409
Gammaproteobacteria
GGG
Pro
>WENV170249685
CEQS01029872
147112
Gammaproteobacteria
GGG
Pro
>WENV170249950
CEQS01055154
249887
Gammaproteobacteria
GGT
Thr
>WENV170249630
CEQS01026470
239187
Gammaproteobacteria
GGT
Thr
>WENV170250272
CEQS01076468
113688
Gammaproteobacteria
GTA
Tyr
>WENV170249505
CEQS01017940
147117
Gammaproteobacteria
GTC
Asp
>WENV170249490
CEQS01017291
236366
Gammaproteobacteria
GTG
His
>WENV170249881
CEQS01048421
240642
Gammaproteobacteria
GTT
Asn
>WENV170249697
CEQS01031159
243902
Gammaproteobacteria
GTT
Asn
>WENV170249662
CEQS01028875
268812
Gammaproteobacteria
GTT
Asn
>WENV170250348
CEQS01104920
73305
Gammaproteobacteria
TAA
Leu
>WENV170249279
CEQS01002261
237714
Gammaproteobacteria
TAC
Val
>WENV170249280
CEQS01002261
237713
Gammaproteobacteria
TAC
Val
>WENV170249281
CEQS01002261
237713
Gammaproteobacteria
TAC
Val
>WENV170249551
CEQS01021993
237713
Gammaproteobacteria
TAC
Val
>WENV170249397
CEQS01009899
349095
Gammaproteobacteria
TCC
Gly
>WENV170249629
CEQS01026470
412476
Gammaproteobacteria
TCC
Gly
>WENV170249365
CEQS01007973
164116
Gammaproteobacteria
TCT
Arg
>WENV170250062
CEQS01064796
146807
Gammaproteobacteria
TCT
Arg
>WENV170249300
CEQS01004437
21234
Gammaproteobacteria
TGA
Ser
>WENV170249299
CEQS01004437
16394
Gammaproteobacteria
TGA
Ser
>WENV170249315
CEQS01005331
16394
Gammaproteobacteria
TGA
Ser
>WENV170249374
CEQS01008947
16394
Gammaproteobacteria
TGA
Ser
>WENV170250000
CEQS01059617
16396
Gammaproteobacteria
TGA
Ser
>WENV170249364
CEQS01007973
147055
Gammaproteobacteria
TGG
Pro
>WENV170250095
CEQS01067182
312287
Gammaproteobacteria
TGT
Thr
>WENV170249965
CEQS01056888
237421
Gammaproteobacteria
TGT
Thr
>WENV170250304
CEQS01089111
241136
Gammaproteobacteria
TTG
Gln
>WENV170249654
CEQS01028426
279385
Gammaproteobacteria
TTT
Lys
>WENV170249253
CEQS01000765
238511
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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