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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170250622
CEQT01003171
235837
Gammaproteobacteria
GTT
Asn
>WENV170251820
CEQT01138656
58767
Gammaproteobacteria
CAG
Leu
>WENV170251738
CEQT01133143
249887
Gammaproteobacteria
GGT
Thr
>WENV170252211
CEQT01265672
147053
Gammaproteobacteria
GTT
Asn
>WENV170250868
CEQT01028861
240642
Gammaproteobacteria
GTT
Asn
>WENV170251006
CEQT01045645
240642
Gammaproteobacteria
GTT
Asn
>WENV170251739
CEQT01133239
240642
Gammaproteobacteria
GTT
Asn
>WENV170252113
CEQT01232525
145261
Gammaproteobacteria
CAT
Met
>WENV170250698
CEQT01010753
426403
Gammaproteobacteria
GCA
Cys
>WENV170252044
CEQT01205486
426403
Gammaproteobacteria
GCA
Cys
>WENV170250909
CEQT01034457
243902
Gammaproteobacteria
GTT
Asn
>WENV170250910
CEQT01034457
243902
Gammaproteobacteria
GTT
Asn
>WENV170250911
CEQT01034457
243902
Gammaproteobacteria
GTT
Asn
>WENV170251168
CEQT01064939
269152
Gammaproteobacteria
GTG
His
>WENV170251487
CEQT01104328
238510
Gammaproteobacteria
GCC
Gly
>WENV170252148
CEQT01244598
412476
Gammaproteobacteria
TCC
Gly
>WENV170252147
CEQT01244598
113870
Gammaproteobacteria
GTA
Tyr
>WENV170250884
CEQT01031637
266766
Gammaproteobacteria
TGT
Thr
>WENV170250759
CEQT01016940
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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