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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170255565
CEQX01005427
95975
Gammaproteobacteria
GAG
Leu
>WENV170255510
CEQX01000565
147048
Gammaproteobacteria
CCA
Trp
>WENV170257051
CEQX01152315
279385
Gammaproteobacteria
TTT
Lys
>WENV170256312
CEQX01072240
147779
Gammaproteobacteria
CAT
Met
>WENV170256970
CEQX01146681
199984
Gammaproteobacteria
CAT
Met
>WENV170256997
CEQX01148615
199984
Gammaproteobacteria
CAT
Met
>WENV170256440
CEQX01088308
160030
Gammaproteobacteria
GGG
Pro
>WENV170257602
CEQX01353541
147114
Gammaproteobacteria
CCT
Arg
>WENV170256969
CEQX01146611
99112
Gammaproteobacteria
TAG
Leu
>WENV170256447
CEQX01089583
276072
Gammaproteobacteria
>WENV170257492
CEQX01330526
197713
Gammaproteobacteria
CAT
Met
>WENV170256505
CEQX01095933
59172
Gammaproteobacteria
CAA
Leu
>WENV170255735
CEQX01018247
240619
Gammaproteobacteria
TGT
Thr
>WENV170255994
CEQX01040677
237709
Gammaproteobacteria
GTG
His
>WENV170256478
CEQX01093254
245602
Gammaproteobacteria
TTT
Lys
>WENV170255632
CEQX01011258
161409
Gammaproteobacteria
GGG
Pro
>WENV170256392
CEQX01083170
149073
Gammaproteobacteria
CAT
Met
>WENV170257012
CEQX01149444
340801
Gammaproteobacteria
CCT
Arg
>WENV170255931
CEQX01035747
147052
Gammaproteobacteria
ACG
Arg
>WENV170256583
CEQX01107031
8480
Gammaproteobacteria
GCT
Ser
>WENV170255953
CEQX01037213
23644
Gammaproteobacteria
GGA
Ser
>WENV170255871
CEQX01030464
269152
Gammaproteobacteria
GTG
His
>WENV170255737
CEQX01018247
412476
Gammaproteobacteria
TCC
Gly
>WENV170256245
CEQX01064377
268812
Gammaproteobacteria
GTT
Asn
>WENV170255956
CEQX01037438
237714
Gammaproteobacteria
TAC
Val
>WENV170256338
CEQX01076408
237714
Gammaproteobacteria
TAC
Val
>WENV170256912
CEQX01142405
173040
Gammaproteobacteria
GAC
Val
>WENV170255781
CEQX01021878
147051
Gammaproteobacteria
CAT
Met
>WENV170256475
CEQX01093048
113688
Gammaproteobacteria
GTA
Tyr
>WENV170256335
CEQX01075337
241136
Gammaproteobacteria
TTG
Gln
>WENV170257400
CEQX01295723
250885
Gammaproteobacteria
TGC
Ala
>WENV170255558
CEQX01005086
339597
Gammaproteobacteria
CCG
Arg
>WENV170256473
CEQX01092706
128930
Gammaproteobacteria
GTC
Asp
>WENV170255773
CEQX01021335
262546
Gammaproteobacteria
TGC
Ala
>WENV170256614
CEQX01109572
262546
Gammaproteobacteria
TGC
Ala
>WENV170256273
CEQX01067415
59658
Gammaproteobacteria
CAA
Leu
>WENV170255955
CEQX01037438
237713
Gammaproteobacteria
TAC
Val
>WENV170255743
CEQX01018504
147120
Gammaproteobacteria
CGG
Pro
>WENV170256798
CEQX01131814
247088
Gammaproteobacteria
CCA
Trp
>WENV170255948
CEQX01037038
149037
Gammaproteobacteria
GAC
Val
>WENV170256627
CEQX01111541
411735
Gammaproteobacteria
GCA
Cys
>WENV170256429
CEQX01087690
16460
Gammaproteobacteria
TGA
Ser
>WENV170255623
CEQX01010970
147117
Gammaproteobacteria
GTC
Asp
>WENV170257605
CEQX01353736
431614
Gammaproteobacteria
GCA
Cys
>WENV170256317
CEQX01072922
175964
Gammaproteobacteria
CAT
Met
>WENV170256673
CEQX01116620
147049
Gammaproteobacteria
GGG
Pro
>WENV170255738
CEQX01018247
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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