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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170258845
CEQY01113246
165001
Bacteroidota
GTT
Asn
>WENV170259225
CEQY01157894
97610
Bacteroidota
GTA
Tyr
>WENV170259826
CEQY01218905
179643
Bacteroidota
GTC
Asp
>WENV170258745
CEQY01101658
127458
Bacteroidota
GAC
Val
>WENV170258293
CEQY01053254
364423
Bacteroidota
GGT
Thr
>WENV170259369
CEQY01173678
161616
Bacteroidota
CAT
Met
>WENV170257880
CEQY01020609
96678
Bacteroidota
TAG
Leu
>WENV170258376
CEQY01060634
60695
Bacteroidota
GCT
Ser
>WENV170258409
CEQY01063669
127414
Bacteroidota
TGG
Pro
>WENV170259083
CEQY01140511
127414
Bacteroidota
TGG
Pro
>WENV170259625
CEQY01196672
127414
Bacteroidota
TGG
Pro
>WENV170258528
CEQY01076820
242524
Bacteroidota
GCC
Gly
>WENV170258004
CEQY01029223
190649
Bacteroidota
GTT
Asn
>WENV170259081
CEQY01140333
44938
Bacteroidota
TGA
Ser
>WENV170258233
CEQY01048689
197220
Bacteroidota
TGT
Thr
>WENV170259224
CEQY01157894
197220
Bacteroidota
TGT
Thr
>WENV170259393
CEQY01176551
235802
Bacteroidota
CAT
Met
>WENV170259179
CEQY01151318
246641
Bacteroidota
GAA
Phe
>WENV170259419
CEQY01179817
246641
Bacteroidota
GAA
Phe
>WENV170258039
CEQY01031577
185921
Bacteroidota
GTC
Asp
>WENV170258586
CEQY01084291
185921
Bacteroidota
GTC
Asp
>WENV170258804
CEQY01107988
185921
Bacteroidota
GTC
Asp
>WENV170258887
CEQY01118392
185921
Bacteroidota
GTC
Asp
>WENV170258943
CEQY01123279
185921
Bacteroidota
GTC
Asp
>WENV170258023
CEQY01030419
148047
Bacteroidota
CAT
Met
>WENV170259953
CEQY01325681
179613
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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