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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170259926
CEQY01311415
147053
Gammaproteobacteria
GTT
Asn
>WENV170259642
CEQY01197588
171935
Gammaproteobacteria
ACG
Arg
>WENV170258699
CEQY01097625
163940
Gammaproteobacteria
CCG
Arg
>WENV170260111
CEQY01393344
197713
Gammaproteobacteria
CAT
Met
>WENV170258655
CEQY01093025
240619
Gammaproteobacteria
TGT
Thr
>WENV170259464
CEQY01185019
240642
Gammaproteobacteria
GTT
Asn
>WENV170258599
CEQY01086540
69672
Gammaproteobacteria
TAA
Leu
>WENV170259665
CEQY01199296
69672
Gammaproteobacteria
TAA
Leu
>WENV170257846
CEQY01018365
152301
Gammaproteobacteria
GAT
Ile
>WENV170259285
CEQY01164734
238510
Gammaproteobacteria
GCC
Gly
>WENV170259362
CEQY01172948
238510
Gammaproteobacteria
GCC
Gly
>WENV170258657
CEQY01093025
412476
Gammaproteobacteria
TCC
Gly
>WENV170258037
CEQY01031423
173040
Gammaproteobacteria
GAC
Val
>WENV170258458
CEQY01069633
341782
Gammaproteobacteria
TTG
Gln
>WENV170257877
CEQY01020285
128930
Gammaproteobacteria
GTC
Asp
>WENV170259629
CEQY01196934
243485
Gammaproteobacteria
TGT
Thr
>WENV170257768
CEQY01011075
262546
Gammaproteobacteria
TGC
Ala
>WENV170258605
CEQY01087329
247088
Gammaproteobacteria
CCA
Trp
>WENV170259983
CEQY01343212
411735
Gammaproteobacteria
GCA
Cys
>WENV170258585
CEQY01084215
175964
Gammaproteobacteria
CAT
Met
>WENV170258658
CEQY01093025
239187
Gammaproteobacteria
GGT
Thr
>WENV170258521
CEQY01075633
179150
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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