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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170264467
CERD01035427
237493
Alphaproteobacteria
CCA
Trp
>WENV170264471
CERD01035811
237493
Alphaproteobacteria
CCA
Trp
>WENV170264579
CERD01047541
339737
Alphaproteobacteria
GAC
Val
>WENV170265233
CERD01121790
419488
Alphaproteobacteria
TCC
Gly
>WENV170265196
CERD01118723
58865
Alphaproteobacteria
GAG
Leu
>WENV170264596
CERD01048658
267922
Alphaproteobacteria
CCA
Trp
>WENV170264550
CERD01044503
10665
Alphaproteobacteria
GCT
Ser
>WENV170264405
CERD01031516
241021
Alphaproteobacteria
GGC
Ala
>WENV170264981
CERD01095645
241021
Alphaproteobacteria
GGC
Ala
>WENV170264576
CERD01047357
193550
Alphaproteobacteria
TCT
Arg
>WENV170265458
CERD01186248
191197
Alphaproteobacteria
CCG
Arg
>WENV170264717
CERD01062192
375044
Alphaproteobacteria
GCC
Gly
>WENV170265119
CERD01109864
375044
Alphaproteobacteria
GCC
Gly
>WENV170264845
CERD01076287
239119
Alphaproteobacteria
CGT
Thr
>WENV170264420
CERD01032662
421153
Alphaproteobacteria
>WENV170264469
CERD01035491
421153
Alphaproteobacteria
>WENV170264242
CERD01016812
368245
Alphaproteobacteria
>WENV170264917
CERD01084711
254188
Alphaproteobacteria
CCA
Trp
>WENV170264228
CERD01016194
95928
Alphaproteobacteria
TAG
Leu
>WENV170265609
CERD01230368
239035
Alphaproteobacteria
CGC
Ala
>WENV170264760
CERD01067038
162801
Alphaproteobacteria
GTG
His
>WENV170264858
CERD01078370
82652
Alphaproteobacteria
GTA
Tyr
>WENV170265128
CERD01111190
82652
Alphaproteobacteria
GTA
Tyr
>WENV170265042
CERD01102724
345376
Alphaproteobacteria
GAC
Val
>WENV170264321
CERD01025791
339722
Alphaproteobacteria
TTG
Gln
>WENV170265136
CERD01112389
147334
Alphaproteobacteria
CAT
Met
>WENV170265537
CERD01213177
157999
Alphaproteobacteria
TCT
Arg
>WENV170265459
CERD01186251
243803
Alphaproteobacteria
CAT
Met
>WENV170264867
CERD01079479
113716
Alphaproteobacteria
CAA
Leu
>WENV170265068
CERD01105907
294226
Alphaproteobacteria
>WENV170264515
CERD01040252
339725
Alphaproteobacteria
GAA
Phe
>WENV170265435
CERD01174531
339725
Alphaproteobacteria
GAA
Phe
>WENV170264910
CERD01083772
258175
Alphaproteobacteria
CGC
Ala
>WENV170264473
CERD01035922
239037
Alphaproteobacteria
TTT
Lys
>WENV170264952
CERD01091224
339305
Alphaproteobacteria
GGT
Thr
>WENV170265010
CERD01099297
359842
Alphaproteobacteria
GAC
Val
>WENV170264464
CERD01035298
65244
Alphaproteobacteria
CAG
Leu
>WENV170265198
CERD01118960
10657
Alphaproteobacteria
GCT
Ser
>WENV170264987
CERD01096822
80837
Alphaproteobacteria
TAA
Leu
>WENV170264590
CERD01048166
338622
Alphaproteobacteria
GTT
Asn
>WENV170264591
CERD01048167
338622
Alphaproteobacteria
GTT
Asn
>WENV170265488
CERD01197622
424918
Alphaproteobacteria
TCC
Gly
>WENV170265403
CERD01158261
147283
Alphaproteobacteria
GTG
His
>WENV170264932
CERD01087776
338288
Alphaproteobacteria
TTC
Glu
>WENV170265008
CERD01099189
96322
Alphaproteobacteria
CAA
Leu
>WENV170264196
CERD01013522
412281
Alphaproteobacteria
CTG
Gln
>WENV170264085
CERD01003753
369678
Alphaproteobacteria
GGT
Thr
>WENV170265424
CERD01169061
150194
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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