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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170266022
CERE01031984
80917
Alphaproteobacteria
CAG
Leu
>WENV170266616
CERE01093141
59361
Alphaproteobacteria
GAG
Leu
>WENV170266454
CERE01072166
267922
Alphaproteobacteria
CCA
Trp
>WENV170266172
CERE01046050
113700
Alphaproteobacteria
>WENV170266134
CERE01042820
144964
Alphaproteobacteria
TGG
Pro
>WENV170266352
CERE01060071
23468
Alphaproteobacteria
GCT
Ser
>WENV170265995
CERE01029303
176908
Alphaproteobacteria
GTC
Asp
>WENV170266210
CERE01050434
23671
Alphaproteobacteria
CGA
Ser
>WENV170266351
CERE01060018
338282
Alphaproteobacteria
GTT
Asn
>WENV170267059
CERE01184630
339723
Alphaproteobacteria
>WENV170266832
CERE01114688
95928
Alphaproteobacteria
TAG
Leu
>WENV170266630
CERE01095229
339722
Alphaproteobacteria
TTG
Gln
>WENV170266221
CERE01051779
237740
Alphaproteobacteria
TTT
Lys
>WENV170266019
CERE01031357
80918
Alphaproteobacteria
GAG
Leu
>WENV170266111
CERE01040972
147334
Alphaproteobacteria
CAT
Met
>WENV170265974
CERE01027096
157999
Alphaproteobacteria
TCT
Arg
>WENV170265798
CERE01014359
281594
Alphaproteobacteria
TGT
Thr
>WENV170266983
CERE01167177
338757
Alphaproteobacteria
GAC
Val
>WENV170266688
CERE01100516
338289
Alphaproteobacteria
GAC
Val
>WENV170266780
CERE01107120
27877
Alphaproteobacteria
GGA
Ser
>WENV170266341
CERE01059523
113716
Alphaproteobacteria
CAA
Leu
>WENV170265998
CERE01029354
278005
Alphaproteobacteria
>WENV170266762
CERE01106906
412279
Alphaproteobacteria
CCC
Gly
>WENV170265861
CERE01020105
339750
Alphaproteobacteria
GGT
Thr
>WENV170266076
CERE01037653
148158
Alphaproteobacteria
ACG
Arg
>WENV170265682
CERE01006089
28682
Alphaproteobacteria
GGA
Ser
>WENV170266198
CERE01048903
23672
Alphaproteobacteria
GCT
Ser
>WENV170265949
CERE01026154
364533
Alphaproteobacteria
GCC
Gly
>WENV170266802
CERE01108140
148083
Alphaproteobacteria
ACG
Arg
>WENV170266148
CERE01044017
412477
Alphaproteobacteria
GCA
Cys
>WENV170266628
CERE01095138
338760
Alphaproteobacteria
GAA
Phe
>WENV170266188
CERE01047683
424918
Alphaproteobacteria
TCC
Gly
>WENV170266992
CERE01170881
147283
Alphaproteobacteria
GTG
His
>WENV170266073
CERE01037184
338288
Alphaproteobacteria
TTC
Glu
>WENV170266554
CERE01086278
279830
Alphaproteobacteria
TAC
Val
>WENV170265847
CERE01019005
113715
Alphaproteobacteria
TAG
Leu
>WENV170265629
CERE01000286
236256
Alphaproteobacteria
TAC
Val
>WENV170266661
CERE01098505
147286
Alphaproteobacteria
CGG
Pro
>WENV170266708
CERE01103169
343498
Alphaproteobacteria
GGT
Thr
>WENV170266510
CERE01080303
147088
Alphaproteobacteria
CCT
Arg
>WENV170266262
CERE01055073
113767
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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