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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170269237
CERH01077054
313881
Gammaproteobacteria
GGC
Ala
>WENV170269046
CERH01029586
279385
Gammaproteobacteria
TTT
Lys
>WENV170269011
CERH01022932
163940
Gammaproteobacteria
CCG
Arg
>WENV170268984
CERH01018370
240619
Gammaproteobacteria
TGT
Thr
>WENV170268937
CERH01011050
174801
Gammaproteobacteria
TGG
Pro
>WENV170269264
CERH01081875
237412
Gammaproteobacteria
TAC
Val
>WENV170268986
CERH01018370
412476
Gammaproteobacteria
TCC
Gly
>WENV170269090
CERH01039480
241136
Gammaproteobacteria
TTG
Gln
>WENV170269059
CERH01032140
175964
Gammaproteobacteria
CAT
Met
>WENV170268987
CERH01018370
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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