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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170271329
CERJ01001211
349650
Alphaproteobacteria
CAC
Val
>WENV170271337
CERJ01002439
16408
Alphaproteobacteria
GGA
Ser
>WENV170271342
CERJ01003068
23672
Alphaproteobacteria
GCT
Ser
>WENV170271360
CERJ01004682
237493
Alphaproteobacteria
CCA
Trp
>WENV170271377
CERJ01005719
147286
Alphaproteobacteria
CGG
Pro
>WENV170271412
CERJ01013189
254522
Alphaproteobacteria
GAA
Phe
>WENV170271421
CERJ01014114
339725
Alphaproteobacteria
GAA
Phe
>WENV170271429
CERJ01014705
344517
Alphaproteobacteria
GTT
Asn
>WENV170271433
CERJ01015263
412279
Alphaproteobacteria
CCC
Gly
>WENV170271456
CERJ01017072
254294
Alphaproteobacteria
>WENV170271480
CERJ01021088
147289
Alphaproteobacteria
GTC
Asp
>WENV170271490
CERJ01021408
82652
Alphaproteobacteria
GTA
Tyr
>WENV170271496
CERJ01021591
254188
Alphaproteobacteria
CCA
Trp
>WENV170271528
CERJ01025748
10665
Alphaproteobacteria
GCT
Ser
>WENV170271538
CERJ01029665
160251
Alphaproteobacteria
CAT
Met
>WENV170271554
CERJ01039640
243806
Alphaproteobacteria
CCA
Trp
>WENV170271622
CERJ01068741
237281
Alphaproteobacteria
CGT
Thr
>WENV170271627
CERJ01069658
147283
Alphaproteobacteria
GTG
His
>WENV170271650
CERJ01073797
162801
Alphaproteobacteria
GTG
His
>WENV170271651
CERJ01074037
95928
Alphaproteobacteria
TAG
Leu
>WENV170271660
CERJ01075219
157999
Alphaproteobacteria
TCT
Arg
>WENV170271665
CERJ01075655
412281
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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