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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170276364
CERN01029122
252328
Alphaproteobacteria
TTT
Lys
>WENV170276365
CERN01029122
252328
Alphaproteobacteria
TTT
Lys
>WENV170276142
CERN01005871
237493
Alphaproteobacteria
CCA
Trp
>WENV170276092
CERN01002723
162262
Alphaproteobacteria
GAC
Val
>WENV170276093
CERN01002723
162262
Alphaproteobacteria
GAC
Val
>WENV170276502
CERN01055677
199865
Alphaproteobacteria
CAT
Met
>WENV170276155
CERN01007392
254188
Alphaproteobacteria
CCA
Trp
>WENV170276217
CERN01012071
162801
Alphaproteobacteria
GTG
His
>WENV170276269
CERN01016433
160251
Alphaproteobacteria
CAT
Met
>WENV170276053
CERN01000644
339722
Alphaproteobacteria
TTG
Gln
>WENV170276504
CERN01055785
74116
Alphaproteobacteria
CAG
Leu
>WENV170276072
CERN01001882
252375
Alphaproteobacteria
GTT
Asn
>WENV170276545
CERN01059558
339725
Alphaproteobacteria
GAA
Phe
>WENV170276308
CERN01021458
340106
Alphaproteobacteria
GCC
Gly
>WENV170276500
CERN01055546
243806
Alphaproteobacteria
CCA
Trp
>WENV170276423
CERN01041015
412281
Alphaproteobacteria
CTG
Gln
>WENV170276578
CERN01073010
369678
Alphaproteobacteria
GGT
Thr
>WENV170276490
CERN01054102
191695
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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