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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170278567
CERQ01111907
183605
Gammaproteobacteria
CCG
Arg
>WENV170277693
CERQ01014460
312287
Gammaproteobacteria
TGT
Thr
>WENV170278559
CERQ01110831
149035
Gammaproteobacteria
CCG
Arg
>WENV170278270
CERQ01074161
101028
Gammaproteobacteria
GTA
Tyr
>WENV170277565
CERQ01001224
283668
Gammaproteobacteria
TTT
Lys
>WENV170277649
CERQ01009161
236013
Gammaproteobacteria
TGC
Ala
>WENV170277617
CERQ01006313
160030
Gammaproteobacteria
GGG
Pro
>WENV170278322
CERQ01079573
160030
Gammaproteobacteria
GGG
Pro
>WENV170278569
CERQ01112039
160030
Gammaproteobacteria
GGG
Pro
>WENV170277629
CERQ01007164
185163
Gammaproteobacteria
ACG
Arg
>WENV170279079
CERQ01234017
235452
Gammaproteobacteria
GAA
Phe
>WENV170278025
CERQ01046291
149036
Gammaproteobacteria
CCA
Trp
>WENV170278035
CERQ01047287
149036
Gammaproteobacteria
CCA
Trp
>WENV170278736
CERQ01124106
149036
Gammaproteobacteria
CCA
Trp
>WENV170277731
CERQ01017568
340801
Gammaproteobacteria
CCT
Arg
>WENV170277931
CERQ01037921
6976
Gammaproteobacteria
GCT
Ser
>WENV170278691
CERQ01120516
237412
Gammaproteobacteria
TAC
Val
>WENV170278271
CERQ01074161
346720
Gammaproteobacteria
TCC
Gly
>WENV170277561
CERQ01000697
145713
Gammaproteobacteria
CAT
Met
>WENV170278011
CERQ01045259
250885
Gammaproteobacteria
TGC
Ala
>WENV170277575
CERQ01002374
128930
Gammaproteobacteria
GTC
Asp
>WENV170278254
CERQ01071509
128930
Gammaproteobacteria
GTC
Asp
>WENV170278353
CERQ01083044
240082
Gammaproteobacteria
TTT
Lys
>WENV170278435
CERQ01093678
146807
Gammaproteobacteria
TCT
Arg
>WENV170277984
CERQ01042399
59658
Gammaproteobacteria
CAA
Leu
>WENV170277986
CERQ01042486
59658
Gammaproteobacteria
CAA
Leu
>WENV170278232
CERQ01069026
147117
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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