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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170282658
CERS01246306
235837
Gammaproteobacteria
GTT
Asn
>WENV170281157
CERS01023259
185151
Gammaproteobacteria
TCT
Arg
>WENV170282581
CERS01192835
417812
Gammaproteobacteria
GCA
Cys
>WENV170282819
CERS01312803
149035
Gammaproteobacteria
CCG
Arg
>WENV170281393
CERS01047399
241476
Gammaproteobacteria
TTT
Lys
>WENV170280981
CERS01008862
160030
Gammaproteobacteria
GGG
Pro
>WENV170282075
CERS01133585
171935
Gammaproteobacteria
ACG
Arg
>WENV170281049
CERS01013890
185163
Gammaproteobacteria
ACG
Arg
>WENV170281050
CERS01013890
185163
Gammaproteobacteria
ACG
Arg
>WENV170281220
CERS01029260
145261
Gammaproteobacteria
CAT
Met
>WENV170281156
CERS01023259
149038
Gammaproteobacteria
TGG
Pro
>WENV170282727
CERS01279182
247974
Gammaproteobacteria
CCA
Trp
>WENV170281809
CERS01096806
173040
Gammaproteobacteria
GAC
Val
>WENV170281907
CERS01108565
411842
Gammaproteobacteria
GCA
Cys
>WENV170282625
CERS01225328
250885
Gammaproteobacteria
TGC
Ala
>WENV170281366
CERS01044609
243485
Gammaproteobacteria
TGT
Thr
>WENV170281200
CERS01027680
59658
Gammaproteobacteria
CAA
Leu
>WENV170282467
CERS01183700
179150
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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