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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170283336
CERU01000306
237493
Alphaproteobacteria
CCA
Trp
>WENV170283374
CERU01004074
419488
Alphaproteobacteria
TCC
Gly
>WENV170283360
CERU01002625
254294
Alphaproteobacteria
>WENV170283385
CERU01005612
58865
Alphaproteobacteria
GAG
Leu
>WENV170283423
CERU01010164
10665
Alphaproteobacteria
GCT
Ser
>WENV170283337
CERU01000490
162262
Alphaproteobacteria
GAC
Val
>WENV170283338
CERU01000490
162262
Alphaproteobacteria
GAC
Val
>WENV170283365
CERU01002942
339724
Alphaproteobacteria
TTG
Gln
>WENV170283339
CERU01000596
16408
Alphaproteobacteria
GGA
Ser
>WENV170283668
CERU01064819
254188
Alphaproteobacteria
CCA
Trp
>WENV170283404
CERU01007859
95928
Alphaproteobacteria
TAG
Leu
>WENV170283382
CERU01005515
162801
Alphaproteobacteria
GTG
His
>WENV170283409
CERU01008715
82652
Alphaproteobacteria
GTA
Tyr
>WENV170283378
CERU01005052
339725
Alphaproteobacteria
GAA
Phe
>WENV170283380
CERU01005321
340106
Alphaproteobacteria
GCC
Gly
>WENV170283384
CERU01005559
167926
Alphaproteobacteria
CAT
Met
>WENV170283455
CERU01014721
412281
Alphaproteobacteria
CTG
Gln
>WENV170283362
CERU01002757
147289
Alphaproteobacteria
GTC
Asp
>WENV170283477
CERU01018512
147289
Alphaproteobacteria
GTC
Asp
>WENV170283577
CERU01037170
147289
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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