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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170287365
CERX01014698
235837
Gammaproteobacteria
GTT
Asn
>WENV170288230
CERX01077466
147048
Gammaproteobacteria
CCA
Trp
>WENV170288765
CERX01121551
147048
Gammaproteobacteria
CCA
Trp
>WENV170289410
CERX01158964
58767
Gammaproteobacteria
CAG
Leu
>WENV170289784
CERX01265079
149035
Gammaproteobacteria
CCG
Arg
>WENV170288068
CERX01064519
146624
Gammaproteobacteria
CAT
Met
>WENV170288227
CERX01077045
58822
Gammaproteobacteria
CAA
Leu
>WENV170288917
CERX01132511
160030
Gammaproteobacteria
GGG
Pro
>WENV170289024
CERX01139512
45109
Gammaproteobacteria
GGA
Ser
>WENV170288408
CERX01092708
59440
Gammaproteobacteria
TAA
Leu
>WENV170288298
CERX01082690
240642
Gammaproteobacteria
GTT
Asn
>WENV170287487
CERX01021979
149036
Gammaproteobacteria
CCA
Trp
>WENV170288407
CERX01092708
412799
Gammaproteobacteria
GCA
Cys
>WENV170289580
CERX01194605
340801
Gammaproteobacteria
CCT
Arg
>WENV170287139
CERX01002104
243895
Gammaproteobacteria
>WENV170287140
CERX01002104
243895
Gammaproteobacteria
>WENV170288780
CERX01123045
113688
Gammaproteobacteria
GTA
Tyr
>WENV170287980
CERX01058144
237418
Gammaproteobacteria
GTT
Asn
>WENV170288035
CERX01062480
237418
Gammaproteobacteria
GTT
Asn
>WENV170288580
CERX01105996
412373
Gammaproteobacteria
GCA
Cys
>WENV170288823
CERX01125394
243485
Gammaproteobacteria
TGT
Thr
>WENV170288709
CERX01116126
249892
Gammaproteobacteria
GTT
Asn
>WENV170288494
CERX01098795
59658
Gammaproteobacteria
CAA
Leu
>WENV170287256
CERX01008846
147120
Gammaproteobacteria
CGG
Pro
>WENV170288204
CERX01075272
237438
Gammaproteobacteria
GAA
Phe
>WENV170287474
CERX01021405
247088
Gammaproteobacteria
CCA
Trp
>WENV170287762
CERX01040519
247088
Gammaproteobacteria
CCA
Trp
>WENV170287978
CERX01057905
247088
Gammaproteobacteria
CCA
Trp
>WENV170287431
CERX01018363
237159
Gammaproteobacteria
GTG
His
>WENV170288373
CERX01090443
411735
Gammaproteobacteria
GCA
Cys
>WENV170288909
CERX01131883
147117
Gammaproteobacteria
GTC
Asp
>WENV170287430
CERX01018363
150297
Gammaproteobacteria
TCT
Arg
>WENV170288158
CERX01072147
239187
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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