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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170290311
CESA01006215
245602
Gammaproteobacteria
TTT
Lys
>WENV170290366
CESA01010362
411766
Gammaproteobacteria
GCA
Cys
>WENV170290451
CESA01017925
237421
Gammaproteobacteria
TGT
Thr
>WENV170290458
CESA01018729
236033
Gammaproteobacteria
TGT
Thr
>WENV170290525
CESA01024579
237421
Gammaproteobacteria
TGT
Thr
>WENV170290545
CESA01026227
244202
Gammaproteobacteria
TTT
Lys
>WENV170290604
CESA01031890
98124
Gammaproteobacteria
GAG
Leu
>WENV170290621
CESA01033919
241476
Gammaproteobacteria
TTT
Lys
>WENV170290639
CESA01035457
16453
Gammaproteobacteria
TGA
Ser
>WENV170290651
CESA01037523
128930
Gammaproteobacteria
GTC
Asp
>WENV170290678
CESA01041086
240642
Gammaproteobacteria
GTT
Asn
>WENV170290708
CESA01044178
23442
Gammaproteobacteria
GCT
Ser
>WENV170290709
CESA01044178
171935
Gammaproteobacteria
ACG
Arg
>WENV170290726
CESA01045687
260238
Gammaproteobacteria
>WENV170290743
CESA01047896
238510
Gammaproteobacteria
GCC
Gly
>WENV170290768
CESA01051409
411767
Gammaproteobacteria
TCC
Gly
>WENV170290769
CESA01051409
338635
Gammaproteobacteria
GGT
Thr
>WENV170290821
CESA01055595
236027
Gammaproteobacteria
GTT
Asn
>WENV170290840
CESA01058472
236029
Gammaproteobacteria
TGC
Ala
>WENV170290848
CESA01059643
236030
Gammaproteobacteria
CCA
Trp
>WENV170290979
CESA01071737
148148
Gammaproteobacteria
GAC
Val
>WENV170291140
CESA01091145
236031
Gammaproteobacteria
GGC
Ala
>WENV170291159
CESA01093351
338635
Gammaproteobacteria
GGT
Thr
>WENV170291207
CESA01098934
6976
Gammaproteobacteria
GCT
Ser
>WENV170291208
CESA01099425
236028
Gammaproteobacteria
TTT
Lys
>WENV170291254
CESA01104594
236031
Gammaproteobacteria
GGC
Ala
>WENV170291258
CESA01105028
147647
Gammaproteobacteria
CAT
Met
>WENV170291282
CESA01109091
236027
Gammaproteobacteria
GTT
Asn
>WENV170291319
CESA01115082
145485
Gammaproteobacteria
ACG
Arg
>WENV170291449
CESA01130425
145491
Gammaproteobacteria
GGG
Pro
>WENV170291473
CESA01133241
173040
Gammaproteobacteria
GAC
Val
>WENV170291548
CESA01140499
236032
Gammaproteobacteria
GAA
Phe
>WENV170291751
CESA01196935
247088
Gammaproteobacteria
CCA
Trp
>WENV170291801
CESA01213340
95717
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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