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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170294069
CESC01034170
381459
Alphaproteobacteria
CAC
Val
>WENV170293829
CESC01012621
80917
Alphaproteobacteria
CAG
Leu
>WENV170293978
CESC01026993
306070
Alphaproteobacteria
CCA
Trp
>WENV170294203
CESC01047965
66752
Alphaproteobacteria
CAG
Leu
>WENV170294052
CESC01032407
113700
Alphaproteobacteria
>WENV170293918
CESC01019684
23671
Alphaproteobacteria
CGA
Ser
>WENV170294759
CESC01153239
338282
Alphaproteobacteria
GTT
Asn
>WENV170293727
CESC01004223
339723
Alphaproteobacteria
>WENV170293925
CESC01020716
147083
Alphaproteobacteria
GGG
Pro
>WENV170294821
CESC01167689
147577
Alphaproteobacteria
CCG
Arg
>WENV170293972
CESC01026226
95928
Alphaproteobacteria
TAG
Leu
>WENV170293681
CESC01000782
162801
Alphaproteobacteria
GTG
His
>WENV170294066
CESC01034117
162801
Alphaproteobacteria
GTG
His
>WENV170294613
CESC01094297
339722
Alphaproteobacteria
TTG
Gln
>WENV170294265
CESC01055326
80918
Alphaproteobacteria
GAG
Leu
>WENV170294662
CESC01115824
147334
Alphaproteobacteria
CAT
Met
>WENV170294415
CESC01072451
74116
Alphaproteobacteria
CAG
Leu
>WENV170293684
CESC01001140
113716
Alphaproteobacteria
CAA
Leu
>WENV170294255
CESC01054578
412279
Alphaproteobacteria
CCC
Gly
>WENV170293914
CESC01019205
339725
Alphaproteobacteria
GAA
Phe
>WENV170294100
CESC01036736
258175
Alphaproteobacteria
CGC
Ala
>WENV170294550
CESC01089287
369678
Alphaproteobacteria
GGT
Thr
>WENV170294132
CESC01040324
339609
Alphaproteobacteria
GGT
Thr
>WENV170294078
CESC01034801
113715
Alphaproteobacteria
TAG
Leu
>WENV170293892
CESC01017137
377327
Alphaproteobacteria
GCC
Gly
>WENV170294065
CESC01033852
377327
Alphaproteobacteria
GCC
Gly
>WENV170294627
CESC01100947
342846
Alphaproteobacteria
GAC
Val
>WENV170294070
CESC01034170
236256
Alphaproteobacteria
TAC
Val
>WENV170294692
CESC01131873
147286
Alphaproteobacteria
CGG
Pro
>WENV170294039
CESC01031398
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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