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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170305640
CESI01155275
80917
Alphaproteobacteria
CAG
Leu
>WENV170304178
CESI01024438
113700
Alphaproteobacteria
>WENV170304373
CESI01038578
113700
Alphaproteobacteria
>WENV170304694
CESI01069593
113700
Alphaproteobacteria
>WENV170304856
CESI01084706
113700
Alphaproteobacteria
>WENV170303947
CESI01005707
95611
Alphaproteobacteria
TAG
Leu
>WENV170305753
CESI01204989
237197
Alphaproteobacteria
CCA
Trp
>WENV170304363
CESI01037804
338282
Alphaproteobacteria
GTT
Asn
>WENV170304867
CESI01085520
338282
Alphaproteobacteria
GTT
Asn
>WENV170303885
CESI01001069
147083
Alphaproteobacteria
GGG
Pro
>WENV170303932
CESI01003922
147083
Alphaproteobacteria
GGG
Pro
>WENV170303942
CESI01004817
147083
Alphaproteobacteria
GGG
Pro
>WENV170304628
CESI01063097
147083
Alphaproteobacteria
GGG
Pro
>WENV170305540
CESI01151550
339846
Alphaproteobacteria
GAC
Val
>WENV170304380
CESI01039030
147879
Alphaproteobacteria
TGG
Pro
>WENV170305063
CESI01108218
147879
Alphaproteobacteria
TGG
Pro
>WENV170305401
CESI01143016
147879
Alphaproteobacteria
TGG
Pro
>WENV170303911
CESI01003042
147334
Alphaproteobacteria
CAT
Met
>WENV170305794
CESI01239281
159395
Alphaproteobacteria
GTC
Asp
>WENV170305413
CESI01143901
97145
Alphaproteobacteria
TAG
Leu
>WENV170303875
CESI01000801
252148
Alphaproteobacteria
TGT
Thr
>WENV170304353
CESI01036830
252148
Alphaproteobacteria
TGT
Thr
>WENV170304006
CESI01011122
340106
Alphaproteobacteria
GCC
Gly
>WENV170304177
CESI01024438
340106
Alphaproteobacteria
GCC
Gly
>WENV170304505
CESI01050106
148083
Alphaproteobacteria
ACG
Arg
>WENV170305404
CESI01143102
341164
Alphaproteobacteria
GCC
Gly
>WENV170303865
CESI01000220
147877
Alphaproteobacteria
GTG
His
>WENV170304993
CESI01100088
348781
Alphaproteobacteria
GAA
Phe
>WENV170304565
CESI01055864
147283
Alphaproteobacteria
GTG
His
>WENV170304383
CESI01039555
154227
Alphaproteobacteria
CAT
Met
>WENV170304407
CESI01041859
154227
Alphaproteobacteria
CAT
Met
>WENV170304549
CESI01054309
154227
Alphaproteobacteria
CAT
Met
>WENV170303892
CESI01001857
412424
Alphaproteobacteria
TCC
Gly
>WENV170303988
CESI01009496
412424
Alphaproteobacteria
TCC
Gly
>WENV170305003
CESI01101067
412424
Alphaproteobacteria
TCC
Gly
>WENV170305281
CESI01132826
412424
Alphaproteobacteria
TCC
Gly
>WENV170305687
CESI01162045
150356
Alphaproteobacteria
GTC
Asp
>WENV170304832
CESI01083108
342846
Alphaproteobacteria
GAC
Val
>WENV170304203
CESI01026515
236256
Alphaproteobacteria
TAC
Val
>WENV170304566
CESI01055943
236256
Alphaproteobacteria
TAC
Val
>WENV170304764
CESI01075439
411617
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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