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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170307598
CESJ01262551
238010
Alphaproteobacteria
TTT
Lys
>WENV170306925
CESJ01090069
267922
Alphaproteobacteria
CCA
Trp
>WENV170306401
CESJ01029676
113700
Alphaproteobacteria
>WENV170306604
CESJ01049632
113700
Alphaproteobacteria
>WENV170307244
CESJ01134359
113700
Alphaproteobacteria
>WENV170306598
CESJ01049357
147083
Alphaproteobacteria
GGG
Pro
>WENV170306971
CESJ01097144
147083
Alphaproteobacteria
GGG
Pro
>WENV170306116
CESJ01005637
340106
Alphaproteobacteria
GCC
Gly
>WENV170306774
CESJ01069370
161002
Alphaproteobacteria
GTG
His
>WENV170306287
CESJ01020613
368915
Alphaproteobacteria
GGT
Thr
>WENV170306585
CESJ01047228
163860
Alphaproteobacteria
GGG
Pro
>WENV170306713
CESJ01061644
163860
Alphaproteobacteria
GGG
Pro
>WENV170306553
CESJ01043991
339606
Alphaproteobacteria
>WENV170307432
CESJ01165921
26652
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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