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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170307737
CESK01000442
377327
Alphaproteobacteria
GCC
Gly
>WENV170307742
CESK01001604
162801
Alphaproteobacteria
GTG
His
>WENV170307744
CESK01001834
162262
Alphaproteobacteria
GAC
Val
>WENV170307755
CESK01003779
339725
Alphaproteobacteria
GAA
Phe
>WENV170307762
CESK01004269
421153
Alphaproteobacteria
>WENV170307764
CESK01004923
341164
Alphaproteobacteria
GCC
Gly
>WENV170307765
CESK01005041
340106
Alphaproteobacteria
GCC
Gly
>WENV170307766
CESK01005041
340106
Alphaproteobacteria
GCC
Gly
>WENV170307771
CESK01006429
254188
Alphaproteobacteria
CCA
Trp
>WENV170307782
CESK01007018
21074
Alphaproteobacteria
GGA
Ser
>WENV170307797
CESK01008522
306070
Alphaproteobacteria
CCA
Trp
>WENV170307800
CESK01008670
176908
Alphaproteobacteria
GTC
Asp
>WENV170307814
CESK01010478
412281
Alphaproteobacteria
CTG
Gln
>WENV170307825
CESK01012889
191695
Alphaproteobacteria
CCT
Arg
>WENV170307829
CESK01013449
339725
Alphaproteobacteria
GAA
Phe
>WENV170307856
CESK01017334
258175
Alphaproteobacteria
CGC
Ala
>WENV170307858
CESK01017580
21074
Alphaproteobacteria
GGA
Ser
>WENV170307862
CESK01017867
167926
Alphaproteobacteria
CAT
Met
>WENV170307889
CESK01021264
237493
Alphaproteobacteria
CCA
Trp
>WENV170307895
CESK01021849
162801
Alphaproteobacteria
GTG
His
>WENV170307907
CESK01025043
157999
Alphaproteobacteria
TCT
Arg
>WENV170307915
CESK01026975
191695
Alphaproteobacteria
CCT
Arg
>WENV170307920
CESK01028158
151733
Alphaproteobacteria
GGG
Pro
>WENV170307957
CESK01037079
147083
Alphaproteobacteria
GGG
Pro
>WENV170307961
CESK01037698
31506
Alphaproteobacteria
TGA
Ser
>WENV170307968
CESK01038901
369678
Alphaproteobacteria
GGT
Thr
>WENV170307976
CESK01039998
338288
Alphaproteobacteria
TTC
Glu
>WENV170307977
CESK01040017
95928
Alphaproteobacteria
TAG
Leu
>WENV170307984
CESK01040566
369678
Alphaproteobacteria
GGT
Thr
>WENV170308007
CESK01043821
28682
Alphaproteobacteria
GGA
Ser
>WENV170308052
CESK01056939
319925
Alphaproteobacteria
TGT
Thr
>WENV170308071
CESK01071491
80917
Alphaproteobacteria
CAG
Leu
>WENV170308077
CESK01073444
80918
Alphaproteobacteria
GAG
Leu
>WENV170308078
CESK01073451
339722
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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