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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170307826
CESK01013055
279385
Gammaproteobacteria
TTT
Lys
>WENV170307791
CESK01008054
59177
Gammaproteobacteria
TAA
Leu
>WENV170307792
CESK01008125
240619
Gammaproteobacteria
TGT
Thr
>WENV170307748
CESK01002858
147122
Gammaproteobacteria
GGG
Pro
>WENV170307776
CESK01006471
174801
Gammaproteobacteria
TGG
Pro
>WENV170307927
CESK01030548
6976
Gammaproteobacteria
GCT
Ser
>WENV170308073
CESK01072468
319098
Gammaproteobacteria
TAC
Val
>WENV170308015
CESK01044657
241136
Gammaproteobacteria
TTG
Gln
>WENV170307775
CESK01006440
147123
Gammaproteobacteria
CAT
Met
>WENV170307790
CESK01008054
412230
Gammaproteobacteria
GCA
Cys
>WENV170307763
CESK01004740
240082
Gammaproteobacteria
TTT
Lys
>WENV170307948
CESK01036271
411735
Gammaproteobacteria
GCA
Cys
>WENV170307904
CESK01023725
163580
Gammaproteobacteria
GAC
Val
>WENV170307784
CESK01007267
175964
Gammaproteobacteria
CAT
Met
>WENV170307774
CESK01006439
59175
Gammaproteobacteria
CAG
Leu
>WENV170307830
CESK01013473
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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