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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170308249
CESL01012728
237493
Alphaproteobacteria
CCA
Trp
>WENV170309547
CESL01153188
237493
Alphaproteobacteria
CCA
Trp
>WENV170308534
CESL01036262
412917
Alphaproteobacteria
TCC
Gly
>WENV170308500
CESL01033337
10665
Alphaproteobacteria
GCT
Ser
>WENV170308265
CESL01013525
81064
Alphaproteobacteria
GTA
Tyr
>WENV170309486
CESL01147021
159305
Alphaproteobacteria
GTC
Asp
>WENV170308325
CESL01019258
339724
Alphaproteobacteria
TTG
Gln
>WENV170308795
CESL01062141
421153
Alphaproteobacteria
>WENV170309485
CESL01146673
421153
Alphaproteobacteria
>WENV170309241
CESL01115638
147577
Alphaproteobacteria
CCG
Arg
>WENV170308139
CESL01005147
199865
Alphaproteobacteria
CAT
Met
>WENV170309407
CESL01138858
95928
Alphaproteobacteria
TAG
Leu
>WENV170308404
CESL01024735
162801
Alphaproteobacteria
GTG
His
>WENV170309120
CESL01101345
162801
Alphaproteobacteria
GTG
His
>WENV170309554
CESL01153342
162801
Alphaproteobacteria
GTG
His
>WENV170309391
CESL01136092
385404
Alphaproteobacteria
CTC
Glu
>WENV170309593
CESL01155923
339725
Alphaproteobacteria
GAA
Phe
>WENV170308159
CESL01006625
258175
Alphaproteobacteria
CGC
Ala
>WENV170308548
CESL01037495
364533
Alphaproteobacteria
GCC
Gly
>WENV170308195
CESL01008693
160158
Alphaproteobacteria
GAT
Ile
>WENV170309018
CESL01088224
412281
Alphaproteobacteria
CTG
Gln
>WENV170308233
CESL01011946
369678
Alphaproteobacteria
GGT
Thr
>WENV170308678
CESL01049744
29831
Alphaproteobacteria
TGA
Ser
>WENV170309562
CESL01154425
147289
Alphaproteobacteria
GTC
Asp
>WENV170308970
CESL01079982
21074
Alphaproteobacteria
GGA
Ser
>WENV170308286
CESL01015832
377327
Alphaproteobacteria
GCC
Gly
>WENV170308476
CESL01031035
377327
Alphaproteobacteria
GCC
Gly
>WENV170309148
CESL01104415
377327
Alphaproteobacteria
GCC
Gly
>WENV170308709
CESL01053011
191695
Alphaproteobacteria
CCT
Arg
>WENV170309332
CESL01127787
193837
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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