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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170308421
CESL01026300
183605
Gammaproteobacteria
CCG
Arg
>WENV170308235
CESL01012269
312287
Gammaproteobacteria
TGT
Thr
>WENV170308676
CESL01049696
235887
Gammaproteobacteria
GTG
His
>WENV170308141
CESL01005216
163492
Gammaproteobacteria
TGG
Pro
>WENV170308498
CESL01032545
147779
Gammaproteobacteria
CAT
Met
>WENV170308533
CESL01036240
283668
Gammaproteobacteria
TTT
Lys
>WENV170309377
CESL01134211
283668
Gammaproteobacteria
TTT
Lys
>WENV170309060
CESL01093816
248041
Gammaproteobacteria
GGC
Ala
>WENV170308307
CESL01017539
58822
Gammaproteobacteria
CAA
Leu
>WENV170308493
CESL01032215
236013
Gammaproteobacteria
TGC
Ala
>WENV170308384
CESL01023539
160030
Gammaproteobacteria
GGG
Pro
>WENV170309587
CESL01155571
160030
Gammaproteobacteria
GGG
Pro
>WENV170309897
CESL01240859
145367
Gammaproteobacteria
GGG
Pro
>WENV170308730
CESL01054447
269248
Gammaproteobacteria
CCA
Trp
>WENV170309608
CESL01157156
145196
Gammaproteobacteria
CAT
Met
>WENV170308583
CESL01041253
149036
Gammaproteobacteria
CCA
Trp
>WENV170308654
CESL01047403
149036
Gammaproteobacteria
CCA
Trp
>WENV170309510
CESL01148359
146791
Gammaproteobacteria
GAC
Val
>WENV170309370
CESL01133350
17329
Gammaproteobacteria
TGA
Ser
>WENV170309193
CESL01109297
145369
Gammaproteobacteria
CGG
Pro
>WENV170309541
CESL01152554
45345
Gammaproteobacteria
GGA
Ser
>WENV170309551
CESL01153283
340801
Gammaproteobacteria
CCT
Arg
>WENV170308892
CESL01071302
252289
Gammaproteobacteria
TTT
Lys
>WENV170308893
CESL01071302
252289
Gammaproteobacteria
TTT
Lys
>WENV170309650
CESL01158469
309581
Gammaproteobacteria
GAA
Phe
>WENV170308338
CESL01020066
152301
Gammaproteobacteria
GAT
Ile
>WENV170309454
CESL01142654
150587
Gammaproteobacteria
CAT
Met
>WENV170308471
CESL01030497
247974
Gammaproteobacteria
CCA
Trp
>WENV170308731
CESL01054505
247974
Gammaproteobacteria
CCA
Trp
>WENV170308168
CESL01007079
158933
Gammaproteobacteria
CAT
Met
>WENV170308093
CESL01000583
319098
Gammaproteobacteria
TAC
Val
>WENV170309284
CESL01121112
173040
Gammaproteobacteria
GAC
Val
>WENV170309655
CESL01158769
173040
Gammaproteobacteria
GAC
Val
>WENV170308201
CESL01009074
145713
Gammaproteobacteria
CAT
Met
>WENV170309138
CESL01103507
151889
Gammaproteobacteria
CAT
Met
>WENV170309643
CESL01158235
238372
Gammaproteobacteria
CCT
Arg
>WENV170308890
CESL01071180
128930
Gammaproteobacteria
GTC
Asp
>WENV170308521
CESL01035164
243921
Gammaproteobacteria
TTT
Lys
>WENV170309577
CESL01154989
59658
Gammaproteobacteria
CAA
Leu
>WENV170308280
CESL01015152
203054
Gammaproteobacteria
ACG
Arg
>WENV170308281
CESL01015152
203054
Gammaproteobacteria
ACG
Arg
>WENV170308612
CESL01044045
182592
Gammaproteobacteria
GAC
Val
>WENV170308565
CESL01039156
149037
Gammaproteobacteria
GAC
Val
>WENV170308372
CESL01022268
411735
Gammaproteobacteria
GCA
Cys
>WENV170309545
CESL01152995
45411
Gammaproteobacteria
GGA
Ser
>WENV170309072
CESL01095561
101786
Gammaproteobacteria
GAG
Leu
>WENV170308674
CESL01049696
198797
Gammaproteobacteria
TGG
Pro
>WENV170308689
CESL01050849
344326
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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