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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170318539
CESQ01054023
149985
Alphaproteobacteria
ACG
Arg
>WENV170318425
CESQ01042137
113700
Alphaproteobacteria
>WENV170319563
CESQ01175232
282595
Alphaproteobacteria
CCA
Trp
>WENV170320322
CESQ01319453
200119
Alphaproteobacteria
CAT
Met
>WENV170319508
CESQ01166039
339722
Alphaproteobacteria
TTG
Gln
>WENV170319581
CESQ01177753
237740
Alphaproteobacteria
TTT
Lys
>WENV170318637
CESQ01065056
340106
Alphaproteobacteria
GCC
Gly
>WENV170320249
CESQ01261386
412281
Alphaproteobacteria
CTG
Gln
>WENV170319716
CESQ01192174
266073
Alphaproteobacteria
TTT
Lys
>WENV170319761
CESQ01196602
339609
Alphaproteobacteria
GGT
Thr
>WENV170319047
CESQ01110196
113715
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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