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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170318986
CESQ01103239
183605
Gammaproteobacteria
CCG
Arg
>WENV170318672
CESQ01069447
235887
Gammaproteobacteria
GTG
His
>WENV170318671
CESQ01069350
313881
Gammaproteobacteria
GGC
Ala
>WENV170319611
CESQ01181029
313881
Gammaproteobacteria
GGC
Ala
>WENV170319538
CESQ01170607
279385
Gammaproteobacteria
TTT
Lys
>WENV170319674
CESQ01189211
279385
Gammaproteobacteria
TTT
Lys
>WENV170320479
CESQ01411661
149035
Gammaproteobacteria
CCG
Arg
>WENV170319629
CESQ01183231
145368
Gammaproteobacteria
CCT
Arg
>WENV170319577
CESQ01177486
58822
Gammaproteobacteria
CAA
Leu
>WENV170319217
CESQ01128917
61925
Gammaproteobacteria
TAA
Leu
>WENV170318623
CESQ01063167
160030
Gammaproteobacteria
GGG
Pro
>WENV170318768
CESQ01077456
160030
Gammaproteobacteria
GGG
Pro
>WENV170319619
CESQ01182563
160030
Gammaproteobacteria
GGG
Pro
>WENV170320320
CESQ01317292
147114
Gammaproteobacteria
CCT
Arg
>WENV170320036
CESQ01221784
145367
Gammaproteobacteria
GGG
Pro
>WENV170317989
CESQ01006568
185163
Gammaproteobacteria
ACG
Arg
>WENV170319698
CESQ01190865
59211
Gammaproteobacteria
TAA
Leu
>WENV170318782
CESQ01078645
240619
Gammaproteobacteria
TGT
Thr
>WENV170318814
CESQ01081782
240619
Gammaproteobacteria
TGT
Thr
>WENV170319705
CESQ01191547
240642
Gammaproteobacteria
GTT
Asn
>WENV170318309
CESQ01030703
149036
Gammaproteobacteria
CCA
Trp
>WENV170318584
CESQ01059844
149036
Gammaproteobacteria
CCA
Trp
>WENV170318975
CESQ01101735
149036
Gammaproteobacteria
CCA
Trp
>WENV170319329
CESQ01141623
149036
Gammaproteobacteria
CCA
Trp
>WENV170319540
CESQ01170769
149036
Gammaproteobacteria
CCA
Trp
>WENV170318485
CESQ01050232
322642
Gammaproteobacteria
GGT
Thr
>WENV170319037
CESQ01109214
145261
Gammaproteobacteria
CAT
Met
>WENV170318620
CESQ01063082
145369
Gammaproteobacteria
CGG
Pro
>WENV170319950
CESQ01215563
289927
Gammaproteobacteria
GAA
Phe
>WENV170318064
CESQ01011071
199268
Gammaproteobacteria
ACG
Arg
>WENV170318934
CESQ01095614
199268
Gammaproteobacteria
ACG
Arg
>WENV170318605
CESQ01060948
309581
Gammaproteobacteria
GAA
Phe
>WENV170319543
CESQ01171394
309581
Gammaproteobacteria
GAA
Phe
>WENV170319028
CESQ01107881
411766
Gammaproteobacteria
GCA
Cys
>WENV170318339
CESQ01034136
240084
Gammaproteobacteria
GGT
Thr
>WENV170318631
CESQ01064810
173040
Gammaproteobacteria
GAC
Val
>WENV170319994
CESQ01218709
173040
Gammaproteobacteria
GAC
Val
>WENV170320009
CESQ01219905
173040
Gammaproteobacteria
GAC
Val
>WENV170319925
CESQ01213858
241136
Gammaproteobacteria
TTG
Gln
>WENV170318337
CESQ01034119
128930
Gammaproteobacteria
GTC
Asp
>WENV170318818
CESQ01082537
146807
Gammaproteobacteria
TCT
Arg
>WENV170318334
CESQ01034025
243921
Gammaproteobacteria
TTT
Lys
>WENV170318335
CESQ01034025
243921
Gammaproteobacteria
TTT
Lys
>WENV170318651
CESQ01067103
59658
Gammaproteobacteria
CAA
Leu
>WENV170319403
CESQ01151148
59658
Gammaproteobacteria
CAA
Leu
>WENV170320417
CESQ01385542
147120
Gammaproteobacteria
CGG
Pro
>WENV170319476
CESQ01161676
149037
Gammaproteobacteria
GAC
Val
>WENV170320018
CESQ01220554
149037
Gammaproteobacteria
GAC
Val
>WENV170318704
CESQ01072206
411735
Gammaproteobacteria
GCA
Cys
>WENV170318458
CESQ01045484
45411
Gammaproteobacteria
GGA
Ser
>WENV170318168
CESQ01019497
147117
Gammaproteobacteria
GTC
Asp
>WENV170318418
CESQ01041633
175964
Gammaproteobacteria
CAT
Met
>WENV170318000
CESQ01007566
173617
Gammaproteobacteria
GTC
Asp
>WENV170320257
CESQ01268162
150183
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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